RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TCTN2Q96GX1 697 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 BBC3Q96PG8 261 aaPredicted RBP12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 SYTL2Q9HCH5 934 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 PCDHB3Q9Y5E6 796 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 COMMD10Q9Y6G5 202 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 MGAQ8IWI9 3026 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 KRT87PA6NCN2 255 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM187AA6NFU0 413 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 E7EQ34 232 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 SYF2O95926 243 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 CATP04040 527 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 ATP5DP30049 168 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 RPL21P46778 160 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 CLCN7P51798 805 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 ITGA1P56199 1179 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 LY6DQ14210 128 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC5A12Q1EHB4 618 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 CCSMST1Q4G0I0 132 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 UGT3A1Q6NUS8 523 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZNF549Q6P9A3 640 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM199XQ6PEV8 388 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 IGDCC3Q8IVU1 814 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM20CQ8IXL6 584 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 LINC01555Q8NAE3 123 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 OR2L8Q8NGY9 312 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 OR1L3Q8NH93 324 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 MR1Q95460 341 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 LRRC39Q96DD0 335 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC45A3Q96JT2 553 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 NDNQ99608 321 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 GPR21Q99679 349 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 ACTR5Q9H9F9 607 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 LHX9Q9NQ69 397 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM114A2Q9NRY5 505 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 ABCF3Q9NUQ8 709 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 INTS7Q9NVH2 962 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 IL17BQ9UHF5 180 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 TRMT6Q9UJA5 497 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 KCND3Q9UK17 655 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 KLHL20Q9Y2M5 609 aa12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 MRPS18BQ9Y676 258 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-209ENST00000560620 NKX2-8O15522 239 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 RAD51CO43502 376 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 OR2B3O76000 313 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 URI1O94763 535 aaPredicted RBP12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 MATN4O95460 622 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 PRB1P04280 392 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 MAGP20916 626 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 MCM3P25205 808 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 PEBP1P30086 187 aaKnown RBP12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 RPS15P62841 145 aaKnown RBP12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 MC1RQ01726 317 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 GRB7Q14451 532 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 PRAMEF17Q5VTA0 474 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 CPNE9Q8IYJ1 553 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 C2CD4AQ8NCU7 369 aaPredicted RBP12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 FBXO36Q8NEA4 188 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 CT55Q8WUE5 264 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 TTC9Q92623 222 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 INPP5DQ92835 1189 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC30A3Q99726 388 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 MIPEPQ99797 713 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 ERP44Q9BS26 406 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 AARSD1Q9BTE6 412 aaKnown RBP12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC12A9Q9BXP2 914 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM60AQ9NP50 221 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 TAS2R13Q9NYV9 303 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZFATQ9P243 1243 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC17A6Q9P2U8 582 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 DHRS7Q9Y394 339 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 TEX264Q9Y6I9 313 aa12.51□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZNF749O43361 778 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 ITGB2P05107 769 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 ENO3P13929 434 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 PSMB5P28074 263 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 OAS2P29728 719 aaKnown RBP12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 GRIA3P42263 894 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 RGS4P49798 205 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 CKAP4Q07065 602 aaKnown RBP12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 CDC20Q12834 499 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 DNASE1L3Q13609 305 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 ERV3-1Q14264 604 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 GBX1Q14549 363 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZIC1Q15915 447 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 KIAA0408Q6ZU52 694 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 LSM14AQ8ND56 463 aaKnown RBP12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 OR9A1PQ8NGU1 263 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 FLVCR1-AS1Q8TAF5 88 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 CD200R1Q8TD46 325 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 MENTQ9BUN1 341 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 ACAT2Q9BWD1 397 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 RAB17Q9H0T7 212 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms