RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SLC29A3Q9BZD2 475 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 TMEM181Q9P2C4 612 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 NCKAP1Q9Y2A7 1128 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 DYTNA2CJ06 578 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 FADS2P1A8MWK0 482 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 ACOT8O14734 319 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 RGS14O43566 566 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 SLC22A3O75751 556 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 CAPN3P20807 821 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 AP1S2P56377 157 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 TRIM25Q14258 630 aaKnown RBP17.34■□□□□ 0.37
SNX1-208ENST00000559844 MAP7D1Q3KQU3 841 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 TMEM31Q5JXX7 168 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 CYP2U1Q7Z449 544 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 MINDY1Q8N5J2 469 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 BHLHE22Q8NFJ8 381 aaPredicted RBP17.34■□□□□ 0.37
SNX1-208ENST00000559844 SKA2Q8WVK7 121 aaPredicted RBP17.34■□□□□ 0.37
SNX1-208ENST00000559844 GLYATL1Q969I3 302 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 AP2M1Q96CW1 435 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 SPDL1Q96EA4 605 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 ITM2CQ9NQX7 267 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 C6orf203Q9P0P8 240 aaPredicted RBP17.34■□□□□ 0.37
SNX1-208ENST00000559844 USP36Q9P275 1121 aaKnown RBP17.34■□□□□ 0.37
SNX1-208ENST00000559844 PSMD13Q9UNM6 376 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 DOCK9Q9BZ29 2069 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 PLXND1Q9Y4D7 1925 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 TRPM6Q9BX84 2022 aa17.34■□□□□ 0.37
SNX1-208ENST00000559844 PRR33A8MZF0 331 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 H3BNX3 289 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 GFYI3L273 518 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 GPR37L1O60883 481 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 MTX2O75431 263 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 STAMBPO95630 424 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 GDF5P43026 501 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 HTR6P50406 440 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 MS4A2Q01362 244 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 DMWDQ09019 674 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 SFSWAPQ12872 951 aaKnown RBP17.33■□□□□ 0.37
SNX1-208ENST00000559844 MAD2L1Q13257 205 aaPredicted RBP17.33■□□□□ 0.37
SNX1-208ENST00000559844 RCAN2Q14206 197 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 NR6A1Q15406 480 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 SPATS1Q496A3 300 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 VPS26BQ4G0F5 336 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 LAYNQ6UX15 382 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 RETREG3Q86VR2 466 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 SFRP1Q8N474 314 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 RNF148Q8N7C7 305 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 MCOLN3Q8TDD5 553 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 ZNF184Q99676 751 aaPredicted RBP17.33■□□□□ 0.37
SNX1-208ENST00000559844 FZD4Q9ULV1 537 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 CYP8B1Q9UNU6 501 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 ITM2BQ9Y287 266 aa17.33■□□□□ 0.37
SNX1-208ENST00000559844 A0A1W2PP18 115 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 FAM234BA2RU67 622 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 AXIN1O15169 862 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 SGTAO43765 313 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 CSTF1Q05048 431 aaKnown RBP17.33■□□□□ 0.36
SNX1-208ENST00000559844 ABRAXAS2Q15018 415 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 ZNF765Q7L2R6 523 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 MAML2Q8IZL2 1156 aaPredicted RBP17.33■□□□□ 0.36
SNX1-208ENST00000559844 RLN3Q8WXF3 142 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 DTD2Q96FN9 168 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 MAGEB10Q96LZ2 347 aaPredicted RBP17.33■□□□□ 0.36
SNX1-208ENST00000559844 COQ10AQ96MF6 247 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 GPATCH1Q9BRR8 931 aaKnown RBP17.33■□□□□ 0.36
SNX1-208ENST00000559844 SLC52A3Q9NQ40 469 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 MAP10Q9P2G4 905 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 CD300AQ9UGN4 299 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 ZNF318Q5VUA4 2279 aa17.33■□□□□ 0.36
SNX1-208ENST00000559844 LSM1O15116 133 aaKnown RBP17.32■□□□□ 0.36
SNX1-208ENST00000559844 ZNF217O75362 1048 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 SLCO2B1O94956 709 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 MAPK9P45984 424 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 POLR2JP52435 117 aaKnown RBP17.32■□□□□ 0.36
SNX1-208ENST00000559844 OR14C36Q8NHC7 312 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 RAB7BQ96AH8 199 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 FAM131CQ96AQ9 280 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 C1orf50Q9BV19 199 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 MBD1Q9UIS9 605 aaPredicted RBP17.32■□□□□ 0.36
SNX1-208ENST00000559844 LEF1Q9UJU2 399 aaPredicted RBP17.32■□□□□ 0.36
SNX1-208ENST00000559844 CEP192Q8TEP8 1941 aa17.32■□□□□ 0.36
SNX1-208ENST00000559844 CCDC154A6NI56 674 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 IFRD1O00458 451 aaPredicted RBP17.31■□□□□ 0.36
SNX1-208ENST00000559844 CASQ2O14958 399 aaPredicted RBP17.31■□□□□ 0.36
SNX1-208ENST00000559844 SPINT1O43278 529 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 ULK1O75385 1050 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 EEDO75530 441 aaKnown RBP17.31■□□□□ 0.36
SNX1-208ENST00000559844 CLDN9O95484 217 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 HOXA6P31267 233 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 PRLHRP49683 370 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 ADPRHP54922 357 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 TAS2R38P59533 333 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 AP5B1Q2VPB7 878 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 SYTL3Q4VX76 610 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 MBOAT1Q6ZNC8 495 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 GALNT13Q8IUC8 556 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 TMEM126BQ8IUX1 230 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 VRK3Q8IV63 474 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 ABCD2Q9UBJ2 740 aa17.31■□□□□ 0.36
SNX1-208ENST00000559844 KLQ9UEF7 1012 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms