RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 SYDE1Q6ZW31 735 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 GPR135Q8IZ08 494 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 RAB42Q8N4Z0 105 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 C2orf73Q8N5S3 287 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 LMNTD1Q8N9Z9 388 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 LINC01555Q8NAE3 123 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 OR2L8Q8NGY9 312 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 CALML6Q8TD86 181 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 SEC14L1Q92503 715 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 RAD51AP1Q96B01 352 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 RUNDC3BQ96NL0 473 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 FAM167BQ9BTA0 163 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 MENTQ9BUN1 341 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 RAB11FIP5Q9BXF6 653 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 GPR87Q9BY21 358 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 SLC25A18Q9H1K4 315 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 CCDC68Q9H2F9 335 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 FBXO6Q9NRD1 293 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 IRAK4Q9NWZ3 460 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 PCDHGA6Q9Y5G7 932 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 BOD1L1Q8NFC6 3051 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 CDC14CA4D256 554 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 E7EQ34 232 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 J3QKU1 62 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 BANF1O75531 89 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 CREG1O75629 220 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 C1orf105O95561 183 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 PLA2G2AP14555 144 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 CCNFP41002 786 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 PAFAH1B1P43034 410 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 DHX9Q08211 1270 aaKnown RBP12.14□□□□□ -0.47
LRRC28-214ENST00000559433 GBX1Q14549 363 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 CRYMQ14894 314 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 ZIC1Q15915 447 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 DEFB110Q30KQ9 67 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 CCSMST1Q4G0I0 132 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 CRTC2Q53ET0 693 aaPredicted RBP12.14□□□□□ -0.47
LRRC28-214ENST00000559433 KCNMB4Q86W47 210 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 FAM20CQ8IXL6 584 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 SLC38A9Q8NBW4 561 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 SLC22A18Q96BI1 424 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 LRFN5Q96NI6 719 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 ACTL8Q9H568 366 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 ACTR5Q9H9F9 607 aaPredicted RBP12.14□□□□□ -0.47
LRRC28-214ENST00000559433 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
LRRC28-214ENST00000559433 FAM60AQ9NP50 221 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 IARS2Q9NSE4 1012 aaKnown RBP12.14□□□□□ -0.47
LRRC28-214ENST00000559433 GALPQ9UBC7 116 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 FBXO5Q9UKT4 447 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 POLHQ9Y253 713 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 FARSAQ9Y285 508 aaKnown RBP12.14□□□□□ -0.47
LRRC28-214ENST00000559433 FAM169AQ9Y6X4 670 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
LRRC28-214ENST00000559433 PCM1Q15154 2024 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 KRT87PA6NCN2 255 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 CCDC188H7C350 402 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 MEN1O00255 615 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 OR2B3O76000 313 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 HBQ1P09105 142 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 MAGP20916 626 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 AGXTP21549 392 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 PTPN4P29074 926 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 CLCN7P51798 805 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 RPS18P62269 152 aaKnown RBP12.13□□□□□ -0.47
LRRC28-214ENST00000559433 MPP1Q00013 466 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 MORF4L2Q15014 288 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 TTLL9Q3SXZ7 439 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 BBS9Q3SYG4 887 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 MSS51Q4VC12 460 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 HSP90AA5PQ58FG0 334 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 ACSBG2Q5FVE4 666 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 ATG14Q6ZNE5 492 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 DSELQ8IZU8 1212 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 GABPB2Q8TAK5 448 aaPredicted RBP12.13□□□□□ -0.47
LRRC28-214ENST00000559433 MAGEC3Q8TD91 643 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 RUFY1Q96T51 708 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 EBNA1BP2Q99848 306 aaKnown RBP12.13□□□□□ -0.47
LRRC28-214ENST00000559433 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 CHRNA10Q9GZZ6 450 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 CHST8Q9H2A9 424 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 STARD5Q9NSY2 213 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 PCMTD2Q9NV79 361 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.13□□□□□ -0.47
LRRC28-214ENST00000559433 TUBD1Q9UJT1 453 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 KLHL20Q9Y2M5 609 aa12.13□□□□□ -0.47
LRRC28-214ENST00000559433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
LRRC28-214ENST00000559433 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
LRRC28-214ENST00000559433 MKRN2OSH3BPM6 223 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 FANCGO15287 622 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 TTI1O43156 1089 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 ZNF749O43361 778 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 HCRTR1O43613 425 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 MATN4O95460 622 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 TTC4O95801 387 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 RECKO95980 971 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms