RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 CLCNKAP51800 687 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 POLE2P56282 527 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 PPP1CAP62136 330 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 UBE2IP63279 158 aaKnown RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 MC2RQ01718 297 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 TMEM115Q12893 351 aaPredicted RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 XRCC4Q13426 336 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 NFE2L1Q14494 772 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 SPARCL1Q14515 664 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 KCNAB1Q14722 419 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 SLC1A5Q15758 541 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 DEFB109BQ30KR1 87 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 FNBP1LQ5T0N5 605 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 CACHD1Q5VU97 1274 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 DUS1LQ6P1R4 473 aaKnown RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 TMEM220Q6QAJ8 160 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 MICALCLQ6ZW33 695 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 ZNF547Q8IVP9 402 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 RAVER1Q8IY67 606 aaKnown RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 RCOR2Q8IZ40 523 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 TAB3Q8N5C8 712 aaPredicted RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 BMPERQ8N8U9 685 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 RASGEF1AQ8N9B8 481 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 TC2NQ8N9U0 490 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 AVL9Q8NBF6 648 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 TADA1Q96BN2 335 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 MBD6Q96DN6 1003 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 RBM41Q96IZ5 413 aaKnown RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 OR6C1Q96RD1 312 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 RSRP1Q9BUV0 290 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 FAM96AQ9H5X1 160 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 IL26Q9NPH9 171 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 OGFRQ9NZT2 677 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 IL17BQ9UHF5 180 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 LNPEPQ9UIQ6 1025 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 TMPRSS11EQ9UL52 423 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 WDR37Q9Y2I8 494 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 PCDHGA3Q9Y5H0 932 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 MRPS18BQ9Y676 258 aaKnown RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 ARL5AQ9Y689 179 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 LOC285095A0A1B0GVY8 99 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 CCDC78A2IDD5 438 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 GPR89AB7ZAQ6 455 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 CHUKO15111 745 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 KCNN4O15554 427 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 POP7O75817 140 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 STK10O94804 968 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 KIAA0754O94854 1291 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 POLBP06746 335 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 GPR89BP0CG08 455 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 BRAFP15056 766 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 ZNF28P17035 718 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 HLA-DPA1P20036 260 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 MSH3P20585 1137 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 PSMB4P28070 264 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 HMGCLP35914 325 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 DLSTP36957 453 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 CCR10P46092 362 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 ARCN1P48444 511 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 CTSCP53634 463 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 GEMP55040 296 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 EIF3EP60228 445 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 OTUD4Q01804 1114 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 CDC20Q12834 499 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 TBX2Q13207 712 aaPredicted RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 MPP3Q13368 585 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 SQSTM1Q13501 440 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 KRT33BQ14525 404 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 GPRC6AQ5T6X5 926 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 PDPK2PQ6A1A2 396 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 ITPRIPL1Q6GPH6 555 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 C11orf63Q6NUN7 778 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 AADACL2Q6P093 401 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 DARS2Q6PI48 645 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 FAM83HQ6ZRV2 1179 aaPredicted RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 BBS12Q6ZW61 710 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 TIPARPQ7Z3E1 657 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 ARHGAP22Q7Z5H3 698 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 AMZ2Q86W34 360 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 KATNAL2Q8IYT4 538 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 ACRBPQ8NEB7 543 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 OR4K2Q8NGD2 314 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 GPR150Q8NGU9 434 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 CCDC110Q8TBZ0 833 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 ACTL9Q8TC94 416 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 NEU4Q8WWR8 484 aaPredicted RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 SREK1Q8WXA9 508 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 STARD8Q92502 1023 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 STAMBPL1Q96FJ0 436 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 C9orf72Q96LT7 481 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 TEFMQ96QE5 360 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 VPS35Q96QK1 796 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 FCRL5Q96RD9 977 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 SRPK1Q96SB4 655 aaKnown RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 TIMM29Q9BSF4 260 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 WWP1Q9H0M0 922 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 GBA3Q9H227 469 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 SLC40A1Q9NP59 571 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 ZNF71Q9NQZ8 489 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms