RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TCF12Q99081 682 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 TRIM56Q9BRZ2 755 aaKnown RBP16.39■□□□□ 0.21
LRRC28-210ENST00000558879 RAB11FIP5Q9BXF6 653 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 NFS1Q9Y697 457 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 AP1M2Q9Y6Q5 423 aa16.39■□□□□ 0.21
LRRC28-210ENST00000558879 GOLGA8KD6RF30 607 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 GOLGA8TH3BQL2 631 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 PHF2O75151 1096 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 NIPSNAP2O75323 286 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 DNAJB5O75953 348 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 OR2B3O76000 313 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 C1orf105O95561 183 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 ESR1P03372 595 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 CTSBP07858 339 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 BDKRB1P46663 353 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 CSRP3P50461 194 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 TLE1Q04724 770 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 CENPUQ71F23 418 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 OTOAQ7RTW8 1153 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 CILP2Q8IUL8 1156 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 FAM20CQ8IXL6 584 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 AGGF1Q8N302 714 aaeCLIP16.38■□□□□ 0.21
LRRC28-210ENST00000558879 OTUD6BQ8N6M0 293 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 MCUQ8NE86 351 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 CFAP61Q8NHU2 1237 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 HMGCLL1Q8TB92 370 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 PROKR1Q8TCW9 393 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 ACTRT1Q8TDG2 376 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 DENND1AQ8TEH3 1009 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 COG1Q8WTW3 980 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 SLC22A18Q96BI1 424 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 GBP5Q96PP8 586 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 OSBPL9Q96SU4 736 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 NAP1L3Q99457 506 aaPredicted RBP16.38■□□□□ 0.21
LRRC28-210ENST00000558879 DHRS4Q9BTZ2 278 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 CLMPQ9H6B4 373 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 GRPEL1Q9HAV7 217 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 XAB2Q9HCS7 855 aaKnown RBP16.38■□□□□ 0.21
LRRC28-210ENST00000558879 ENAMQ9NRM1 1142 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 CIDEBQ9UHD4 219 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 TLK1Q9UKI8 766 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 SNX7Q9UNH6 387 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 SRPK3Q9UPE1 567 aa16.38■□□□□ 0.21
LRRC28-210ENST00000558879 ZCWPW2A0A1B0GU75 182 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 FAM237BA0A1B0GVD1 139 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 H3BMM5 538 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 CES2O00748 559 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 ZSCAN9O15535 394 aaPredicted RBP16.37■□□□□ 0.21
LRRC28-210ENST00000558879 FKBP9O95302 570 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 MATN4O95460 622 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 PDGFAP04085 211 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 ERGP11308 486 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 PAMP19021 973 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 PTGIRP43119 386 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 FNTAP49354 379 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 TERF1P54274 439 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 CCSMST1Q4G0I0 132 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 FAM69BQ5VUD6 431 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 NAT8LQ8N9F0 302 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 LMNTD1Q8N9Z9 388 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 N4BP2L2Q92802 583 aaPredicted RBP16.37■□□□□ 0.21
LRRC28-210ENST00000558879 RAD51AP1Q96B01 352 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 ZNF669Q96BR6 464 aaPredicted RBP16.37■□□□□ 0.21
LRRC28-210ENST00000558879 SLC7A5P2Q9GIP4 190 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 KCNF1Q9H3M0 494 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 MLXIPLQ9NP71 852 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 IL1RAPL1Q9NZN1 696 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 PLCL2Q9UPR0 1127 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 RUVBL2Q9Y230 463 aaKnown RBP16.37■□□□□ 0.21
LRRC28-210ENST00000558879 PCDHGA9Q9Y5G4 932 aaKnown RBP16.37■□□□□ 0.21
LRRC28-210ENST00000558879 MRFAP1Q9Y605 127 aa16.37■□□□□ 0.21
LRRC28-210ENST00000558879 KRT87PA6NCN2 255 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 CEACAM4O75871 244 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 CBSLP0DN79 551 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 FMO4P31512 558 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 CBSP35520 551 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 DHX34Q14147 1143 aaKnown RBP16.36■□□□□ 0.21
LRRC28-210ENST00000558879 ANKRD20A4Q4UJ75 823 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 TLDC1Q6P9B6 456 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 SDCCAG8Q86SQ7 713 aaPredicted RBP16.36■□□□□ 0.21
LRRC28-210ENST00000558879 TAX1BP1Q86VP1 789 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 C17orf62Q9BQA9 187 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 SPRTNQ9H040 489 aaPredicted RBP16.36■□□□□ 0.21
LRRC28-210ENST00000558879 INTS10Q9NVR2 710 aaKnown RBP16.36■□□□□ 0.21
LRRC28-210ENST00000558879 EURLQ9NYK6 297 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 SPATA7Q9P0W8 599 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 SAMD15Q9P1V8 674 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 CRYL1Q9Y2S2 319 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 KLK4Q9Y5K2 254 aa16.36■□□□□ 0.21
LRRC28-210ENST00000558879 A0A1W2PPV9 198 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 ARGFXA6NJG6 315 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 C9J4A7 227 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 PFDN6O15212 129 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 KLF7O75840 302 aaPredicted RBP16.35■□□□□ 0.21
LRRC28-210ENST00000558879 PKMP14618 531 aaKnown RBP16.35■□□□□ 0.21
LRRC28-210ENST00000558879 AGXTP21549 392 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 CCNFP41002 786 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 KLRB1Q12918 225 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 CHAF1BQ13112 559 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms