RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 NEK1Q96PY6 1258 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 BAG1Q99933 345 aaPredicted RBP4.01□□□□□ -1.77
COPS2-204ENST00000558545 PKP2Q99959 881 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 KLHL4Q9C0H6 718 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 OSGEPL1Q9H4B0 414 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 ERAP1Q9NZ08 941 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 MTUS1Q9ULD2 1270 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 GRIP1Q9Y3R0 1128 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 RIPK3Q9Y572 518 aa4.01□□□□□ -1.77
COPS2-204ENST00000558545 OR2A25A4D2G3 310 aa4□□□□□ -1.77
COPS2-204ENST00000558545 DFFBO76075 338 aa4□□□□□ -1.77
COPS2-204ENST00000558545 IL11P20809 199 aa4□□□□□ -1.77
COPS2-204ENST00000558545 PNLIPRP2P54317 469 aa4□□□□□ -1.77
COPS2-204ENST00000558545 HERV-K104P61576 105 aa4□□□□□ -1.77
COPS2-204ENST00000558545 CDK3Q00526 305 aa4□□□□□ -1.77
COPS2-204ENST00000558545 AIMP1Q12904 312 aaKnown RBP4□□□□□ -1.77
COPS2-204ENST00000558545 PCLAFQ15004 111 aa4□□□□□ -1.77
COPS2-204ENST00000558545 SNAI3Q3KNW1 292 aa4□□□□□ -1.77
COPS2-204ENST00000558545 IGSF11Q5DX21 431 aa4□□□□□ -1.77
COPS2-204ENST00000558545 HAUS6Q7Z4H7 955 aa4□□□□□ -1.77
COPS2-204ENST00000558545 POMGNT2Q8NAT1 580 aa4□□□□□ -1.77
COPS2-204ENST00000558545 MCUQ8NE86 351 aa4□□□□□ -1.77
COPS2-204ENST00000558545 GCNAQ96QF7 691 aa4□□□□□ -1.77
COPS2-204ENST00000558545 LMF2Q9BU23 707 aaKnown RBP4□□□□□ -1.77
COPS2-204ENST00000558545 CLEC7AQ9BXN2 247 aa4□□□□□ -1.77
COPS2-204ENST00000558545 SPATC1LQ9H0A9 340 aa4□□□□□ -1.77
COPS2-204ENST00000558545 ATP13A3Q9H7F0 1226 aa4□□□□□ -1.77
COPS2-204ENST00000558545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4□□□□□ -1.77
COPS2-204ENST00000558545 HACL1Q9UJ83 578 aa4□□□□□ -1.77
COPS2-204ENST00000558545 ZHX1Q9UKY1 873 aaPredicted RBP4□□□□□ -1.77
COPS2-204ENST00000558545 PPIEQ9UNP9 301 aaKnown RBP4□□□□□ -1.77
COPS2-204ENST00000558545 FAM169AQ9Y6X4 670 aa4□□□□□ -1.77
COPS2-204ENST00000558545 LOC100509620A0A075B734 347 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 hCG_1809904A0A1W2PP81 198 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 A0A1W2PPE2 198 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 A0A1W2PR64 198 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 ADAM20O43506 726 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 MED24O75448 989 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 VPREB1P12018 145 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 NKX2-1P43699 371 aaPredicted RBP3.99□□□□□ -1.77
COPS2-204ENST00000558545 PDX1P52945 283 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 SLC8A3P57103 927 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 GSDMDP57764 484 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 UBXN2AP68543 259 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 C15orf59Q2T9L4 293 aaPredicted RBP3.99□□□□□ -1.77
COPS2-204ENST00000558545 PDLIM3Q53GG5 364 aaPredicted RBP3.99□□□□□ -1.77
COPS2-204ENST00000558545 SPECC1Q5M775 1068 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 ARMC3Q5W041 872 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 DOK6Q6PKX4 331 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 FIP1L1Q6UN15 594 aaKnown RBP3.99□□□□□ -1.77
COPS2-204ENST00000558545 IL27RAQ6UWB1 636 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 LDB1Q86U70 411 aaPredicted RBP3.99□□□□□ -1.77
COPS2-204ENST00000558545 KBTBD6Q86V97 674 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 LINC00346Q8IVM7 164 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 SPAG16Q8N0X2 631 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 RAB42Q8N4Z0 105 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 AMER3Q8N944 861 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 OR13J1Q8NGT2 312 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 IRGQQ8WZA9 623 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 NSMCE3Q96MG7 304 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 KIFC3Q9BVG8 833 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 DPAGT1Q9H3H5 408 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 FGF21Q9NSA1 209 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 OSER1Q9NX31 292 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 WSB2Q9NYS7 404 aaPredicted RBP3.99□□□□□ -1.77
COPS2-204ENST00000558545 GRID1Q9ULK0 1009 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 PLAGL1Q9UM63 463 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 ZNF148Q9UQR1 794 aa3.99□□□□□ -1.77
COPS2-204ENST00000558545 HYKKA2RU49 373 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 OR10H2O60403 315 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 PRAMEF11O60813 436 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 AVILO75366 819 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 WDPCPO95876 746 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 IGHV4-31P0DP07 118 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 MATR3P43243 847 aaKnown RBP eCLIP3.98□□□□□ -1.773e-9■■■■□ 21.7
COPS2-204ENST00000558545 CAPZA2P47755 286 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 LIG4P49917 911 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 TMF1P82094 1093 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 POU5F1Q01860 360 aaKnown RBP3.98□□□□□ -1.77
COPS2-204ENST00000558545 ZNF239Q16600 458 aaKnown RBP3.98□□□□□ -1.77
COPS2-204ENST00000558545 UGP2Q16851 508 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 FASTKD1Q53R41 847 aaKnown RBP3.98□□□□□ -1.77
COPS2-204ENST00000558545 BSPRYQ5W0U4 402 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 KRT79Q5XKE5 535 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 RPUSD3Q6P087 351 aaKnown RBP3.98□□□□□ -1.77
COPS2-204ENST00000558545 ADGRA1Q86SQ6 560 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 LACC1Q8IV20 430 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 CEP57L1Q8IYX8 460 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 POGLUT1Q8NBL1 392 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 KBTBD8Q8NFY9 601 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 OR2AJ1Q8NGZ0 328 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 ZMAT2Q96NC0 199 aaKnown RBP3.98□□□□□ -1.77
COPS2-204ENST00000558545 ABHD1Q96SE0 405 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 PAFAH2Q99487 392 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 CPVLQ9H3G5 476 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 RABEP2Q9H5N1 569 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 ZCCHC17Q9NP64 241 aaKnown RBP3.98□□□□□ -1.77
COPS2-204ENST00000558545 CCDC177Q9NQR7 707 aaPredicted RBP3.98□□□□□ -1.77
COPS2-204ENST00000558545 SPHK1Q9NYA1 384 aa3.98□□□□□ -1.77
COPS2-204ENST00000558545 PSD3Q9NYI0 1048 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms