RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 CDHR3Q6ZTQ4 885 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 CMC1Q7Z7K0 106 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 BANPQ8N9N5 519 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 TCP10LQ8TDR4 215 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 CDKN2AIPNLQ96HQ2 116 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 TGM7Q96PF1 710 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 OR6C1Q96RD1 312 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 RBBP8Q99708 897 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 CPNE1Q99829 537 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 MCMBPQ9BTE3 642 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 TRIM55Q9BYV6 548 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 FAM83DQ9H4H8 585 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 RMI1Q9H9A7 625 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 FBXO6Q9NRD1 293 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 ZNF624Q9P2J8 865 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 SLC17A7Q9P2U7 560 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 ATXN10Q9UBB4 475 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 SLC23A2Q9UGH3 650 aa10.9□□□□□ -0.66
RABGGTA-204ENST00000558376 SEC16AO15027 2179 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 OR5K4A6NMS3 321 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 GPR39O43194 453 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 KIF1CO43896 1103 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 CREG1O75629 220 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 DNAJB5O75953 348 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 CRTAMO95727 393 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 SLC2A4P14672 509 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 CA4P22748 312 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 CLCNKAP51800 687 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 WDR4P57081 412 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 PRAMEP78395 509 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 SEMA3AQ14563 771 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 TAF1AQ15573 450 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 CNSTQ6PJW8 725 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 TMEM26Q6ZUK4 368 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 ARFGAP2Q8N6H7 521 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 OTUD6BQ8N6M0 293 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 GALNT11Q8NCW6 608 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 LYSMD1Q96S90 227 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 TWSG1Q9GZX9 223 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 UCK1Q9HA47 277 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 KLC4Q9NSK0 619 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 INTS9Q9NV88 658 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 GRID1Q9ULK0 1009 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 PIPSLA2A3N6 862 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 C2orf81A6NN90 581 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 AGFG2O95081 481 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 FGF5P12034 268 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 XRCC1P18887 633 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 PAMP19021 973 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 LPOP22079 712 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 ZNF140P52738 457 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 DNASE1L3Q13609 305 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 IL11RAQ14626 422 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 NLRP9Q7RTR0 991 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 TAX1BP1Q86VP1 789 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 ZC3HC1Q86WB0 502 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 RASGRP3Q8IV61 690 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 RAVER1Q8IY67 606 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 TTC30BQ8N4P2 665 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 DENND1AQ8TEH3 1009 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 CT55Q8WUE5 264 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 NAT14Q8WUY8 206 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 GPR63Q9BZJ6 419 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 ZNF768Q9H5H4 540 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 AKIRIN1Q9H9L7 192 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 PCMTD2Q9NV79 361 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 NLE1Q9NVX2 485 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 ZNF358Q9NW07 568 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 FKBPLQ9UIM3 349 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 FBXO5Q9UKT4 447 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 SLC39A10Q9ULF5 831 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 CRYL1Q9Y2S2 319 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 PCDHGA6Q9Y5G7 932 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 ACTL7BQ9Y614 415 aa10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 TEP1Q99973 2627 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-204ENST00000558376 WDR91A4D1P6 747 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 TTLL8A6PVC2 850 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 SEMA7AO75326 666 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 VPS4BO75351 444 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 UBXN7O94888 489 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 TIAF1O95411 115 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 S1PR4O95977 384 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 AMD1P17707 334 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 TYK2P29597 1187 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 LSP1P33241 339 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 CA5AP35218 305 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 SPRP35270 261 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 SERPINB9P50453 376 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 SLC18A2Q05940 514 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 SF3A3Q12874 501 aaKnown RBP eCLIP10.88□□□□□ -0.672e-7■■■■■ 27.5
RABGGTA-204ENST00000558376 ZNF460Q14592 562 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 FHL5Q5TD97 284 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 ZNF449Q6P9G9 518 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 APLFQ8IW19 511 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 CNTN4Q8IWV2 1026 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 SPATA6LQ8N4H0 392 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 C2CD4AQ8NCU7 369 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 OR4L1Q8NH43 312 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 STYXQ8WUJ0 223 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms