RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 OR2T5Q6IEZ7 315 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 SUSD1Q6UWL2 747 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 TRIM46Q7Z4K8 759 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 SNX20Q7Z614 316 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 TTC16Q8NEE8 873 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 OR10Q1Q8NGQ4 319 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 OR2T29Q8NH02 315 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 IPCEF1Q8WWN9 437 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 EGFL8Q99944 293 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 YIPF2Q9BWQ6 316 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 FAM126AQ9BYI3 521 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 TM9SF3Q9HD45 589 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 SLC6A13Q9NSD5 602 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 FARSBQ9NSD9 589 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 IL37Q9NZH6 218 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 OPTCQ9UBM4 332 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 AGO1Q9UL18 857 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 PCDHGC4Q9Y5F7 938 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 EFCAB9A8MZ26 197 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 MYO1GB0I1T2 1018 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 TAPBPO15533 448 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 UPK1BO75841 260 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 OAZ2O95190 189 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF682O95780 498 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 RGS4P49798 205 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 GBX1Q14549 363 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 LAPTM4AQ15012 233 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 MAD2L1BPQ15013 274 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 USP39Q53GS9 565 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 GDF6Q6KF10 455 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 CEP68Q76N32 757 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 RGL4Q8IZJ4 473 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 TTC29Q8NA56 475 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 CLHC1Q8NHS4 586 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 BARD1Q99728 777 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 SLX1AQ9BQ83 275 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 ELOVL2Q9NXB9 296 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 WWOXQ9NZC7 414 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 TRPS1Q9UHF7 1281 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 MAN2B2Q9Y2E5 1009 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 PCNTO95613 3336 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 SAGE2PA6NJ88 616 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 KDELR3O43731 214 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 CCNDBP1O95273 360 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 MYCLP1P12525 358 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 BCKDHAP12694 445 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 DNAJA1P31689 397 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 S100A3P33764 101 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 MAGEA11P43364 429 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 CLK1P49759 484 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 TUBA1BP68363 451 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 CACNG1Q06432 222 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 MGAT3Q09327 533 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 TAF10Q12962 218 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 MORN1Q5T089 497 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF362Q5T0B9 420 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 PTRHD1Q6GMV3 140 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 TUBA3EQ6PEY2 450 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 TUBA1AQ71U36 451 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 TSPYL5Q86VY4 417 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 ELMOD1Q8N336 334 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 RPL3LQ92901 407 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 ULK4Q96C45 1275 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 CTRCQ99895 268 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 ADAM2Q99965 735 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 MMP27Q9H306 513 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 NDRG4Q9ULP0 352 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 OARD1Q9Y530 152 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 OR2A25A4D2G3 310 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 TAF4O00268 1085 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 MANBAO00462 879 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 EBLN1P0CF75 366 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 FPR1P21462 350 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 S100A1P23297 94 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 RPS14P62263 151 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 SMN1Q16637 294 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF181Q2M3W8 571 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 USP50Q70EL3 339 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 AKAP14Q86UN6 197 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 LYSMD2Q8IV50 215 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 C10orf111Q8N326 155 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 TXNDC15Q96J42 360 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 CD244Q9BZW8 370 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 DCSTAMPQ9H295 470 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 PARVBQ9HBI1 364 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 IL1RAPQ9NPH3 570 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 KIF17Q9P2E2 1029 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 PNMA8BQ9ULN7 279 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 ABCG2Q9UNQ0 655 aa11.54□□□□□ -0.56
VIPAS39-211ENST00000557658 AREL1O15033 823 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 EFNA1P20827 205 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 TGFBR2P37173 567 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 GDF5P43026 501 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 GJA8P48165 433 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 SLC13A2Q13183 592 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 DSC3Q14574 896 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF404Q494X3 552 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 C5orf22Q49AR2 442 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms