RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PLAGL1Q9UM63 463 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 BTRCQ9Y297 605 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 NFS1Q9Y697 457 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 SLC9B1P1A6NJY1 282 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 ISM1B1AKI9 464 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 PSIP1O75475 530 aaKnown RBP12.08□□□□□ -0.48
SLIRP-211ENST00000557623 F7P08709 466 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-211ENST00000557623 EBLN1P0CF75 366 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 UGT2B7P16662 529 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 GABRB3P28472 473 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 BDKRB1P46663 353 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 RGS4P49798 205 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 TUBB4BP68371 445 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 SLC7A5Q01650 507 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 TUBB3Q13509 450 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 MAP7Q14244 749 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 GRB7Q14451 532 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 SLC5A12Q1EHB4 618 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 COL28A1Q2UY09 1125 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
SLIRP-211ENST00000557623 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.48
SLIRP-211ENST00000557623 MANEAQ5SRI9 462 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 FAM45BPQ6NSW5 357 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 C19orf48Q6RUI8 117 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 SLC26A11Q86WA9 606 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 CEP112Q8N8E3 955 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 FBXO25Q8TCJ0 367 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 CD200R1Q8TD46 325 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 CDKL2Q92772 493 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 TRAPPC9Q96Q05 1148 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 OR2A14Q96R47 310 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 CCNL2Q96S94 520 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-211ENST00000557623 NDNQ99608 321 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 MENTQ9BUN1 341 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 FAM129AQ9BZQ8 928 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 TWSG1Q9GZX9 223 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 FGF21Q9NSA1 209 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 LNPEPQ9UIQ6 1025 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 MED16Q9Y2X0 877 aa12.08□□□□□ -0.48
SLIRP-211ENST00000557623 TMEM184BQ9Y519 407 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-211ENST00000557623 A0A0J9YY10 115 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 ZNF839A8K0R7 811 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 ZBTB14O43829 449 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 RAD1O60671 282 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 SPAG6O75602 509 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 STK17BO94768 372 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 FKBP9O95302 570 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 MT-ND3P03897 115 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 MSL3P1P0C860 447 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 FOLR1P15328 257 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 ST6GAL1P15907 406 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 MAP4P27816 1152 aaKnown RBP12.07□□□□□ -0.48
SLIRP-211ENST00000557623 HSD17B2P37059 387 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 CUL1Q13616 776 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 KCNAB1Q14722 419 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 FBXO38Q6PIJ6 1188 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 ZDHHC24Q6UX98 284 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 CEP128Q6ZU80 1094 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 CYS1Q717R9 158 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 RETREG3Q86VR2 466 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 CACNA2D3Q8IZS8 1091 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 NLGN4XQ8N0W4 816 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 IL22RA1Q8N6P7 574 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 GPATCH11Q8N954 259 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 FBXO15Q8NCQ5 510 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-211ENST00000557623 NLGN4YQ8NFZ3 816 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-211ENST00000557623 OR9A1PQ8NGU1 263 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 HMGCLL1Q8TB92 370 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 SEC14L1Q92503 715 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 NKD1Q969G9 470 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 TCTN2Q96GX1 697 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 PPM1MQ96MI6 270 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 SLC30A3Q99726 388 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 NRTNQ99748 197 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 ULBP3Q9BZM4 244 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 SPRY4Q9C004 299 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 INTS7Q9NVH2 962 aaKnown RBP12.07□□□□□ -0.48
SLIRP-211ENST00000557623 SPHK1Q9NYA1 384 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 PILRAQ9UKJ1 303 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 USP24Q9UPU5 2620 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 VWA7Q9Y334 891 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 ANKRD12Q6UB98 2062 aa12.07□□□□□ -0.48
SLIRP-211ENST00000557623 FREM2Q5SZK8 3169 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 KRT37O76014 449 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 DLGAP3O95886 979 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 MCM3P25205 808 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 OAS2P29728 719 aaKnown RBP12.06□□□□□ -0.48
SLIRP-211ENST00000557623 SSTR1P30872 391 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 MAGEA4P43358 317 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 ARHGAP19Q14CB8 494 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 TGIF1Q15583 401 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 RBM20Q5T481 1227 aaKnown RBP12.06□□□□□ -0.48
SLIRP-211ENST00000557623 HECTD2Q5U5R9 776 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CYHR1Q6ZMK1 362 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CCDC81Q6ZN84 652 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CAPN12Q6ZSI9 719 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 C3orf62Q6ZUJ4 267 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms