RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 COG1Q8WTW3 980 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 TM9SF4Q92544 642 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 TCTN2Q96GX1 697 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
VRK1-206ENST00000557222 TRAPPC9Q96Q05 1148 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 FERD3LQ96RJ6 166 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 TCF12Q99081 682 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 COPS8Q99627 209 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 BARD1Q99728 777 aaKnown RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 TLR10Q9BXR5 811 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 SLC7A5P2Q9GIP4 190 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 GBA3Q9H227 469 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 OR52A5Q9H2C5 316 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 CASS4Q9NQ75 786 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 SAE1Q9UBE0 346 aaPredicted RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 RSPH14Q9UHP6 348 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 B3GNT3Q9Y2A9 372 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 ARL5AQ9Y689 179 aa8.38□□□□□ -1.07
VRK1-206ENST00000557222 TEP1Q99973 2627 aaKnown RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 DIDO1Q9BTC0 2240 aaKnown RBP8.38□□□□□ -1.07
VRK1-206ENST00000557222 IGLV3-16A0A075B6K0 115 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 hCG_1818297A0A087WSY0 165 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 GSAPA4D1B5 854 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 APOC4-APOC2K7ER74 178 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 BTN3A3O00478 584 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 BTN3A1O00481 513 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 PEX12O00623 359 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 GSC2O15499 205 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 GPR39O43194 453 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 ZNF749O43361 778 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 CBFA2T2O43439 604 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 BUD23O43709 281 aaKnown RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 LDLRP01130 860 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 APOC2P02655 101 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 POLBP06746 335 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 TPM1P09493 284 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 ST6GAL1P15907 406 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 PECAM1P16284 738 aaPredicted RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 ITGALP20701 1170 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 MRPL49Q13405 166 aaKnown RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 MSLNQ13421 630 aaPredicted RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 ATP1A4Q13733 1029 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 BOP1Q14137 746 aaKnown RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 PRPSAP1Q14558 356 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 PLEKHN1Q494U1 663 aaPredicted RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 ZRANB3Q5FWF4 1079 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 CRB2Q5IJ48 1285 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 DCAF10Q5QP82 559 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 FAM182AQ5T1J6 154 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 PRAMEF17Q5VTA0 474 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 LYPLAL1Q5VWZ2 237 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 DUS1LQ6P1R4 473 aaKnown RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 FDX2Q6P4F2 183 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 BBS12Q6ZW61 710 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 B4GALNT4Q76KP1 1039 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 DET1Q7L5Y6 550 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 MRGPREQ86SM8 312 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 TICAM1Q8IUC6 712 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 TRIM42Q8IWZ5 723 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 FAM20CQ8IXL6 584 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 CLEC1AQ8NC01 280 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 LRRC45Q96CN5 670 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 SNRNP40Q96DI7 357 aaKnown RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 RBM41Q96IZ5 413 aaKnown RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 PPM1MQ96MI6 270 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 CITED4Q96RK1 184 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 AP1M1Q9BXS5 423 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 COG4Q9H9E3 785 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 NHEJ1Q9H9Q4 299 aaPredicted RBP8.37□□□□□ -1.07
VRK1-206ENST00000557222 LIN7BQ9HAP6 207 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 ARNT2Q9HBZ2 717 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 CRLS1Q9UJA2 301 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 SRPK3Q9UPE1 567 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 SLC5A6Q9Y289 635 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 EFR3BQ9Y2G0 817 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
VRK1-206ENST00000557222 ALG6Q9Y672 507 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 APCP25054 2843 aa8.37□□□□□ -1.07
VRK1-206ENST00000557222 A0A096LPE4 126 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 TRBV5-4A0A0C4DH59 114 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 LOC100289279A0A1B0GTE1 492 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 A0A1W2PPZ6 126 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 HMX2A2RU54 273 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 CCDC66A2RUB6 948 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 A6NL46 340 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 H3BMH7 237 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 H7C0S8 307 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 QSOX1O00391 747 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 KDM1AO60341 852 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 STK10O94804 968 aaKnown RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 AP2A2O94973 939 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 LCA5LO95447 670 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ONECUT2O95948 504 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 AGTP01019 485 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 RNF224P0DH78 156 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ARCN1P48444 511 aaKnown RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 LMAN1P49257 510 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ZNF140P52738 457 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms