RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 UNC50Q53HI1 259 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.95□□□□□ -0.98
ACTN1-218ENST00000556343 PRAMEF14Q5SWL7 426 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 THEMIS2Q5TEJ8 643 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 TTC19Q6DKK2 380 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-218ENST00000556343 ARMC6Q6NXE6 501 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 GTF2H2CQ6P1K8 395 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 OGFOD3Q6PK18 319 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 EFL1Q7Z2Z2 1120 aaKnown RBP8.95□□□□□ -0.98
ACTN1-218ENST00000556343 WDR75Q8IWA0 830 aaKnown RBP8.95□□□□□ -0.98
ACTN1-218ENST00000556343 KLHDC8AQ8IYD2 350 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 SFRP1Q8N474 314 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 OR52E1Q8NGJ3 308 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 OR2L8Q8NGY9 312 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 OR56A3Q8NH54 315 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 ATOH1Q92858 354 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-218ENST00000556343 FAR2Q96K12 515 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 C7orf26Q96N11 449 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 SRMSQ9H3Y6 488 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 UCK1Q9HA47 277 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 CCDC177Q9NQR7 707 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-218ENST00000556343 NLGN3Q9NZ94 848 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 GPRC5BQ9NZH0 403 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 OR6C2Q9NZP2 312 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 R4GN57 208 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 THADAQ6YHU6 1953 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 PIKFYVEQ9Y2I7 2098 aa8.95□□□□□ -0.98
ACTN1-218ENST00000556343 DOCK9Q9BZ29 2069 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 RHPN2P1A8MT19 583 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 MATN2O00339 956 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 TAPBPO15533 448 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 FOXD2O60548 495 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SDC3O75056 442 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 FKBP9O95302 570 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 TGDSO95455 350 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SLC16A8O95907 504 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 RPS17P08708 135 aaKnown RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 HRH2P25021 359 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 IMPA1P29218 277 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 EPHA8P29322 1005 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SLC6A12P48065 614 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 PPM1FP49593 454 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 DUSP3P51452 185 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 UBE2IP63279 158 aaKnown RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 HHEXQ03014 270 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 CDC16Q13042 620 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 NAA25Q14CX7 972 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 HIST2H2ACQ16777 129 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 DEFB133Q30KQ1 61 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 PTCHD3Q3KNS1 767 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 HIST2H2AA3Q6FI13 130 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 XKR5Q6UX68 686 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ZCCHC23Q6ZST2 131 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 FRMD7Q6ZUT3 714 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 GOLGA7Q7Z5G4 137 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 MILR1Q7Z6M3 343 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 THOC6Q86W42 341 aaKnown RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 AMIGO1Q86WK6 493 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 CLYBLQ8N0X4 340 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 NAGSQ8N159 534 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ARL14Q8N4G2 192 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 TBC1D19Q8N5T2 526 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 TEX9Q8N6V9 391 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ARL10Q8N8L6 244 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 OR6Y1Q8NGX8 325 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 HMGCLL1Q8TB92 370 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SLC37A2Q8TED4 501 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 TRPC4APQ8TEL6 797 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ZNF483Q8TF39 744 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ZNF480Q8WV37 535 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 CCT6BQ92526 530 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 TMEM237Q96Q45 408 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SLC38A3Q99624 504 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SIKE1Q9BRV8 207 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 GTPBP2Q9BX10 602 aaKnown RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ATG10Q9H0Y0 220 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 EPN3Q9H201 632 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 NOL11Q9H8H0 719 aaKnown RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 IPPKQ9H8X2 491 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 PRM3Q9NNZ6 103 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SLC40A1Q9NP59 571 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 PSD3Q9NYI0 1048 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 SCHIP1Q9P0W5 487 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ZNF624Q9P2J8 865 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-218ENST00000556343 VTI1BQ9UEU0 232 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 PCTPQ9UKL6 214 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 RAP2CQ9Y3L5 183 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 PCDHB11Q9Y5F2 797 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ENTPD2Q9Y5L3 495 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 ST14Q9Y5Y6 855 aa8.94□□□□□ -0.98
ACTN1-218ENST00000556343 E7ENX8 843 aa8.93□□□□□ -0.98
ACTN1-218ENST00000556343 E2F3O00716 465 aa8.93□□□□□ -0.98
ACTN1-218ENST00000556343 UGDHO60701 494 aa8.93□□□□□ -0.98
ACTN1-218ENST00000556343 LRP3O75074 770 aa8.93□□□□□ -0.98
ACTN1-218ENST00000556343 SNNO75324 88 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-218ENST00000556343 SIX3O95343 332 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-218ENST00000556343 ESRRBO95718 433 aa8.93□□□□□ -0.98
ACTN1-218ENST00000556343 ENO1P06733 434 aaKnown RBP8.93□□□□□ -0.98
ACTN1-218ENST00000556343 CELA2BP08218 269 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-218ENST00000556343 ZNF806P0C7X5 589 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms