RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SLC5A12Q1EHB4 618 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 TTLL9Q3SXZ7 439 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 STEAP4Q687X5 459 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ZNF549Q6P9A3 640 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 TTC23LQ6PF05 361 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 CNSTQ6PJW8 725 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 KIAA0408Q6ZU52 694 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ZNF572Q7Z3I7 529 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 MAATS1Q7Z4T9 603 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 IGDCC3Q8IVU1 814 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 CNTN4Q8IWV2 1026 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ZSCAN1Q8NBB4 408 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 C2CD4AQ8NCU7 369 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 BBOF1Q8ND07 529 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 GIMAP7Q8NHV1 300 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 FLVCR1-AS1Q8TAF5 88 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 SKA2Q8WVK7 121 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 KIAA1143Q96AT1 154 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 RAD51AP1Q96B01 352 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ZNF501Q96CX3 271 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 C16orf45Q96MC5 204 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 PWWP2AQ96N64 755 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 TRAPPC9Q96Q05 1148 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 OR2A14Q96R47 310 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 PLAC1Q9HBJ0 212 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 IARS2Q9NSE4 1012 aaKnown RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 SPHK1Q9NYA1 384 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ZC3H7BQ9UGR2 993 aaKnown RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 LNPEPQ9UIQ6 1025 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 CHMP2BQ9UQN3 213 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 RUVBL2Q9Y230 463 aaKnown RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 MED16Q9Y2X0 877 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 NFS1Q9Y697 457 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 TEX264Q9Y6I9 313 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 SPTBP11277 2137 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ATRXP46100 2492 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 E7ESA3 106 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 RASGRF2O14827 1237 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 RAD51CO43502 376 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 MATN4O95460 622 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 MT-ND3P03897 115 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 ENO3P13929 434 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 PVRP15151 417 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 WT1P19544 449 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 CD9P21926 228 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 BDKRB1P46663 353 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 CKAP4Q07065 602 aaKnown RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 CALCOCO2Q13137 446 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 CBLBQ13191 982 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 FRG1Q14331 258 aaKnown RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 ACSBG2Q5FVE4 666 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 PWWP2BQ6NUJ5 590 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 C6orf15Q6UXA7 325 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 NEK10Q6ZWH5 1172 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 GALNT7Q86SF2 657 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 TRIM73Q86UV7 250 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 RAB42Q8N4Z0 105 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 C19orf47Q8N9M1 422 aaKnown RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 LINC01555Q8NAE3 123 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 GALNT6Q8NCL4 622 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 OR2L8Q8NGY9 312 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 MAGEC3Q8TD91 643 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 SLC22A18Q96BI1 424 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 CFAP36Q96G28 342 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 SLC30A3Q99726 388 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 ERP44Q9BS26 406 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 AARSD1Q9BTE6 412 aaKnown RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 EFHD1Q9BUP0 239 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 CHRNA10Q9GZZ6 450 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 GPN2Q9H9Y4 310 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-205ENST00000556310 SPATA7Q9P0W8 599 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 WHRNQ9P202 907 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 GALPQ9UBC7 116 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 SLC39A10Q9ULF5 831 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 SNX24Q9Y343 169 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 PIEZO2Q9H5I5 2752 aa11.14□□□□□ -0.63
SLIRP-205ENST00000556310 LOC101059948A0A1B0GTJ6 334 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 ARHGEF33A8MVX0 844 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 ISM1B1AKI9 464 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 EIF3FO00303 357 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 ATXN7O15265 892 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 CPNE3O75131 537 aaKnown RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 VPS26AO75436 327 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 PSIP1O75475 530 aaKnown RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 SCRG1O75711 98 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 HAUS5O94927 633 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 CATP04040 527 aaKnown RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 PDIA2Q13087 525 aaKnown RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 KLHL38Q2WGJ6 581 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 HP1BP3Q5SSJ5 553 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-205ENST00000556310 KIAA1614Q5VZ46 1190 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 TMEM126BQ8IUX1 230 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 HMGCLL1Q8TB92 370 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 CD200R1Q8TD46 325 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 TCTN2Q96GX1 697 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 SLC45A3Q96JT2 553 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 IL17FQ96PD4 163 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 GPR21Q99679 349 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms