RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 WWOXQ9NZC7 414 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ZIM2Q9NZV7 527 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 CD84Q9UIB8 345 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 MBD1Q9UIS9 605 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ANGPTL2Q9UKU9 493 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 CCL27Q9Y4X3 112 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 TIMM22Q9Y584 194 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 MYOFQ9NZM1 2061 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 GBF1Q92538 1859 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 C17orf113A0A1B0GUU1 675 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 A0A1W2PP18 115 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ARNTLO00327 626 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 SLC28A1O00337 649 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 IFRD1O00458 451 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 TSPAN6O43657 245 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 AP1G1O43747 822 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 VEGFDO43915 354 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ATG13O75143 517 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 TBX10O75333 385 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 PSIP1O75475 530 aaKnown RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 KRT36O76013 467 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 RECQL5O94762 991 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CLDN9O95484 217 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 SOD1P00441 154 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 APODP05090 189 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CAPN1P07384 714 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 HLA-EP13747 358 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CYP2A7P20853 494 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ME2P23368 584 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 TEAD1P28347 426 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 BMP8BP34820 402 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 IL12RB1P42701 662 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 MTHFRP42898 656 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 HSPA7P48741 367 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 PSME3P61289 254 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 AP2B1P63010 937 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 FOXM1Q08050 763 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 HSPA14Q0VDF9 509 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 TMEM115Q12893 351 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 TRAP1Q12931 704 aaKnown RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CAMK2GQ13555 558 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CCNIQ14094 377 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 RCN1Q15293 331 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 RPS6KA2Q15349 733 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 C18orf21Q32NC0 220 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ATP6AP1LQ52LC2 224 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 PRMT9Q6P2P2 845 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 XKR5Q6UX68 686 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 PRR23BQ6ZRT6 265 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 GK5Q6ZS86 529 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 UBE2R2Q712K3 238 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 MTSS1LQ765P7 747 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 KBTBD6Q86V97 674 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 MINDY1Q8N5J2 469 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CDYL2Q8N8U2 506 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 OR4F6Q8NGB9 312 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 OR2T11Q8NH01 316 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ATL1Q8WXF7 558 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ELMO1Q92556 727 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 USP7Q93009 1102 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ATP6V1E2Q96A05 226 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ESAMQ96AP7 390 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 FBXL8Q96CD0 374 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CHFRQ96EP1 664 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 MARK4Q96L34 752 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 PPP3R2Q96LZ3 170 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 RIPOR3Q96MK2 946 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 MYADMQ96S97 322 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ACOX2Q99424 681 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 GPATCH1Q9BRR8 931 aaKnown RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 TRMT61BQ9BVS5 477 aaKnown RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 APOL5Q9BWW9 433 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 PLA2G2FQ9BZM2 168 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 RSPH9Q9H1X1 276 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-235ENST00000556082 TRIM39Q9HCM9 518 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 S100A14Q9HCY8 104 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 DYRK4Q9NR20 520 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ARL15Q9NXU5 204 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ASIC5Q9NY37 505 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CCDC167Q9P0B6 97 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 CLEC1BQ9P126 229 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 GPR34Q9UPC5 381 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 ANGPTL3Q9Y5C1 460 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 PCDHGA7Q9Y5G6 932 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 FADS3Q9Y5Q0 445 aa8.09□□□□□ -1.11
ATXN3-235ENST00000556082 FAM234BA2RU67 622 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 LOC730098B7Z3J9 87 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 MANBAO00462 879 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 TRIM38O00635 465 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 MRASO14807 208 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 LIN7AO14910 233 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 LSM1O15116 133 aaKnown RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 LINC01565O15544 149 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 RGS14O43566 566 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 SYNCRIPO60506 623 aaKnown RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 UGDHO60701 494 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 ULK1O75385 1050 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 SLC22A3O75751 556 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 BCAS2O75934 225 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms