RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FBXL4Q9UKA2 621 aa13.79□□□□□ -0.2
CHMP4BP1-201ENST00000556017 NOVA2Q9UNW9 492 aaKnown RBP13.79□□□□□ -0.2
CHMP4BP1-201ENST00000556017 SRPK3Q9UPE1 567 aa13.79□□□□□ -0.2
CHMP4BP1-201ENST00000556017 PLCL2Q9UPR0 1127 aa13.79□□□□□ -0.2
CHMP4BP1-201ENST00000556017 TDRKHQ9Y2W6 561 aaKnown RBP13.79□□□□□ -0.2
CHMP4BP1-201ENST00000556017 HS3ST3B1Q9Y662 390 aa13.79□□□□□ -0.2
CHMP4BP1-201ENST00000556017 CPAMD8Q8IZJ3 1885 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 PEX12O00623 359 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 MAP3K7O43318 606 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 NRP2O60462 931 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 GPC4O75487 556 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 ALPPP05187 535 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 MMP11P24347 488 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 MCM3P25205 808 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 CCR7P32248 378 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 CCDC181Q5TID7 509 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 OVCH1Q7RTY7 1134 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 MCATQ8IVS2 390 aaKnown RBP13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 SLC22A15Q8IZD6 547 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 FAM71DQ8N9W8 422 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 RNF214Q8ND24 703 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 ST6GALNAC3Q8NDV1 305 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 SLC35B2Q8TB61 432 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 FKBP10Q96AY3 582 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 IL17FQ96PD4 163 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 WDR77Q9BQA1 342 aaPredicted RBP13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 SLC26A1Q9H2B4 701 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 LRRC40Q9H9A6 602 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 ATP13A2Q9NQ11 1180 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 IMPACTQ9P2X3 320 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 NDOR1Q9UHB4 597 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 GPN3Q9UHW5 284 aaPredicted RBP13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 AKAP9Q99996 3911 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 MYO7BQ6PIF6 2116 aa13.78□□□□□ -0.2
CHMP4BP1-201ENST00000556017 GRID2IPA4D2P6 1211 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ISM1B1AKI9 464 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 STK10O94804 968 aaKnown RBP13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 IGHEP01854 428 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 FTH1P02794 183 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 PRF1P14222 555 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 GRIA1P42261 906 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 GLRBP48167 497 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 RAB28P51157 221 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 RWDD2BP57060 319 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ACVR1Q04771 509 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 AIMP2Q13155 320 aaKnown RBP13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 PRAMEF13Q5VWM6 474 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TTLL10Q6ZVT0 673 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TMTC1Q8IUR5 882 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CCDC170Q8IYT3 715 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ZADH2Q8N4Q0 377 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 C2orf73Q8N5S3 287 aaPredicted RBP13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 GRHL3Q8TE85 626 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 PPP4R1Q8TF05 950 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 N4BP2L2Q92802 583 aaPredicted RBP13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 NACC2Q96BF6 587 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 PPP1R2P1Q96PQ5 205 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ANP32EQ9BTT0 268 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 WDR54Q9H977 334 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TXLNGQ9NUQ3 528 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CTSFQ9UBX1 484 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TACC2O95359 2948 aa13.77□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ANKRD17O75179 2603 aaKnown RBP13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 A0A1B0GX78 115 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 FITM1A5D6W6 292 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 KRT87PA6NCN2 255 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SOWAHDA6NJG2 315 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 VSTM2BA6NLU5 285 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 IQCF5A8MTL0 148 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 DSCR3O14972 297 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CTSVO60911 334 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TJP3O95049 919 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ALBP02768 609 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CD63P08962 238 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CD9P21926 228 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 GRIA3P42263 894 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CSE1LP55060 971 aaKnown RBP13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CYP2A13Q16696 494 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ZNF449Q6P9G9 518 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SHISA6Q6ZSJ9 500 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ARHGEF18Q6ZSZ5 1173 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TAB3Q8N5C8 712 aaPredicted RBP13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TTC13Q8NBP0 860 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 OR11G2Q8NGC1 345 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 OR52K1Q8NGK4 314 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 HDAC10Q969S8 669 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TMEM121Q9BTD3 319 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 NDC1Q9BTX1 674 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 EPN1Q9Y6I3 576 aaPredicted RBP13.76□□□□□ -0.21
CHMP4BP1-201ENST00000556017 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
CHMP4BP1-201ENST00000556017 BTNL10A8MVZ5 291 aa13.75□□□□□ -0.21
CHMP4BP1-201ENST00000556017 QSOX1O00391 747 aa13.75□□□□□ -0.21
CHMP4BP1-201ENST00000556017 KLHL18O94889 574 aa13.75□□□□□ -0.21
CHMP4BP1-201ENST00000556017 GOT2P00505 430 aaKnown RBP13.75□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ALAS2P22557 587 aa13.75□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ITGA3P26006 1051 aa13.75□□□□□ -0.21
CHMP4BP1-201ENST00000556017 TSFMP43897 325 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms