RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 SMU1Q2TAY7 513 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 PIGGQ5H8A4 983 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 PITRM1Q5JRX3 1037 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 CTSL3PQ5NE16 218 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SAMD4BQ5PRF9 694 aaKnown RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 IRAK1BP1Q5VVH5 260 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 PTRHD1Q6GMV3 140 aaKnown RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 IRGCQ6NXR0 463 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 TLDC1Q6P9B6 456 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 BRAT1Q6PJG6 821 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SHISA2Q6UWI4 295 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 TPGS1Q6ZTW0 290 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 LARP4Q71RC2 724 aaKnown RBP eCLIP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 DHDDSQ86SQ9 333 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 GALNT13Q8IUC8 556 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 BBS7Q8IWZ6 715 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 YAF2Q8IY57 180 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 RAVER1Q8IY67 606 aaKnown RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 CMTM8Q8IZV2 173 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 PDPRQ8NCN5 879 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 FBXO27Q8NI29 283 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 PIP4K2CQ8TBX8 421 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 HCAR2Q8TDS4 363 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 WFIKKN2Q8TEU8 576 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 ZNF483Q8TF39 744 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 UBTD2Q8WUN7 234 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 TWIST2Q8WVJ9 160 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 EZH1Q92800 747 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 EXT2Q93063 718 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 WBP2Q969T9 261 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 FUBP1Q96AE4 644 aaKnown RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 RCN3Q96D15 328 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 ECHDC3Q96DC8 303 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 LINGO1Q96FE5 620 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SCRN2Q96FV2 425 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 MAGEB10Q96LZ2 347 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 MCCC1Q96RQ3 725 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SLC22A12Q96S37 553 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 ZNF184Q99676 751 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SSBP4Q9BWG4 385 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 TPSD1Q9BZJ3 242 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 MUC13Q9H3R2 512 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 PRORYQ9H606 182 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 CLMPQ9H6B4 373 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 RDH14Q9HBH5 336 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 S100A14Q9HCY8 104 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 MID1IP1Q9NPA3 183 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 LATS2Q9NRM7 1088 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 NMRK1Q9NWW6 199 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 CD274Q9NZQ7 290 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 C6orf203Q9P0P8 240 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 NFKBIL1Q9UBC1 381 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SUCOQ9UBS9 1254 aaKnown RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 DKK4Q9UBT3 224 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 CRLS1Q9UJA2 301 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SARDHQ9UL12 918 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 SLC6A14Q9UN76 642 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 POMPQ9Y244 141 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 MED16Q9Y2X0 877 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 NDUFAF1Q9Y375 327 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 ACTL7AQ9Y615 435 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 MYOFQ9NZM1 2061 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 PCDH15Q96QU1 1955 aa6.36□□□□□ -1.39
PSEN1-214ENST00000555867 TLN1Q9Y490 2541 aaKnown RBP6.36□□□□□ -1.39
PSEN1-214ENST00000555867 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 USP9YO00507 2555 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-214ENST00000555867 C15orf38-AP3S2A0A0A6YYH1 394 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 PABPN1LA6NDY0 278 aaKnown RBP6.35□□□□□ -1.39
PSEN1-214ENST00000555867 NPEPPSL1A6NEC2 478 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 TRABD2BA6NFA1 517 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 TMEM233B4DJY2 109 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 WASH3PC4AMC7 463 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 IFRD1O00458 451 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-214ENST00000555867 CASQ2O14958 399 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-214ENST00000555867 PEX1O43933 1283 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 SH3BP5O60239 455 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 NRP2O60462 931 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 ATG13O75143 517 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 NIPSNAP2O75323 286 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 APBB3O95704 486 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 TSPAN12O95859 305 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 OTCP00480 354 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 NPPAP01160 153 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 ASLP04424 464 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 ENO2P09104 434 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-214ENST00000555867 PABPC1P11940 636 aaKnown RBP6.35□□□□□ -1.39
PSEN1-214ENST00000555867 SRCP12931 536 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 MSH3P20585 1137 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 WEE1P30291 646 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 MAPK9P45984 424 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 CCR10P46092 362 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 HSPA13P48723 471 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 CLCN7P51798 805 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 DGKEP52429 567 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 SESN3P58005 492 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 DCDC1P59894 354 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 CDKL1Q00532 357 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 KLC1Q07866 573 aa6.35□□□□□ -1.39
PSEN1-214ENST00000555867 MAD2L1Q13257 205 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-214ENST00000555867 SP140Q13342 867 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms