RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 FAM129CQ86XR2 697 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 HOMEZQ8IX15 550 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 ACMSDQ8TDX5 336 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 ZFPM2Q8WW38 1151 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 KCNJ9Q92806 393 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 ZBTB9Q96C00 473 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 CABS1Q96KC9 395 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 PANX3Q96QZ0 392 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 INSM2Q96T92 566 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 NDNQ99608 321 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 CCM2Q9BSQ5 444 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 AARSD1Q9BTE6 412 aaKnown RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 WWP1Q9H0M0 922 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 P2RY12Q9H244 342 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 ZNF768Q9H5H4 540 aaKnown RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 KIR3DX1Q9H7L2 352 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 COG4Q9H9E3 785 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 FBXO8Q9NRD0 319 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 SLC39A1Q9NY26 324 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 TAS2R13Q9NYV9 303 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 MTO1Q9Y2Z2 717 aaKnown RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 VWA7Q9Y334 891 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 B3GALT1Q9Y5Z6 326 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 UNC13CQ8NB66 2214 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 SMG1Q96Q15 3661 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 A8MU76 341 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 FTH1P02794 183 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 AMD1P17707 334 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CHRM3P20309 590 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 SKIV2L2P42285 1042 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 RAB10P61026 200 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 RHDQ02161 417 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 RPA4Q13156 261 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 RBM20Q5T481 1227 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 DCAF12Q5T6F0 453 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ARHGAP40Q5TG30 622 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 HECTD2Q5U5R9 776 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ANKS6Q68DC2 871 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CAPRIN2Q6IMN6 1127 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CCDC81Q6ZN84 652 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 TRABD2AQ86V40 505 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 SRRM1Q8IYB3 904 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CYP4X1Q8N118 509 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 LILRA3Q8N6C8 439 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CLDN19Q8N6F1 224 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 LSM14AQ8ND56 463 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 MZB1Q8WU39 189 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ISL2Q96A47 359 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ALKBH8Q96BT7 664 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ZDHHC12Q96GR4 267 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 C12orf66Q96MD2 445 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 TSNARE1Q96NA8 513 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 BIRC8Q96P09 236 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 TGM7Q96PF1 710 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 SMC6Q96SB8 1091 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CD180Q99467 661 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ZPBPQ9BS86 351 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 OR52A5Q9H2C5 316 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 POPDC3Q9HBV1 291 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 SNX15Q9NRS6 342 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 SEMA5BQ9P283 1151 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 FAM8A1Q9UBU6 413 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 KLHL3Q9UH77 587 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 TRMT6Q9UJA5 497 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 TLK1Q9UKI8 766 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ACTL7BQ9Y614 415 aa9.36□□□□□ -0.91
ACTN1-215ENST00000555616 CFAP20Q9Y6A4 193 aaKnown RBP9.36□□□□□ -0.91
ACTN1-215ENST00000555616 ATMQ13315 3056 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 A0A087X1B8 175 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 HMX2A2RU54 273 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 OR5K3A6NET4 321 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 KPNA5O15131 536 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 EFSO43281 561 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 KIF1CO43896 1103 aaKnown RBP9.35□□□□□ -0.91
ACTN1-215ENST00000555616 NIPSNAP2O75323 286 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 RFPL1O75677 317 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 ALDOAP04075 364 aaKnown RBP9.35□□□□□ -0.91
ACTN1-215ENST00000555616 PYGBP11216 843 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 KRT4P19013 534 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 CD9P21926 228 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 FDXRP22570 491 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 NDUFS1P28331 727 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 ATP1A2P50993 1020 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 TAS2R39P59534 338 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 MAGOHP61326 146 aaKnown RBP9.35□□□□□ -0.91
ACTN1-215ENST00000555616 PPP1CAP62136 330 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 PLCL1Q15111 1095 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 ZKSCAN8Q15776 578 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-215ENST00000555616 TTLL9Q3SXZ7 439 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 TNFAIP8L3Q5GJ75 292 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 CTSL3PQ5NE16 218 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 IRGCQ6NXR0 463 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 ZNF549Q6P9A3 640 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms