RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PRR23BQ6ZRT6 265 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 SPATA21Q7Z572 469 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 ZBTB44Q8NCP5 570 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 MAGEC3Q8TD91 643 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 UBTD2Q8WUN7 234 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 PPP1R36Q96LQ0 422 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 KCNA7Q96RP8 456 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 SLC32A1Q9H598 525 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 XKR8Q9H6D3 395 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 IPPKQ9H8X2 491 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 KCNK13Q9HB14 408 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 EML4Q9HC35 981 aaKnown RBP9.91□□□□□ -0.82
SRP54-208ENST00000555557 PCOLCE2Q9UKZ9 415 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 ANGPTL3Q9Y5C1 460 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 ZFC3H1O60293 1989 aaKnown RBP9.91□□□□□ -0.82
SRP54-208ENST00000555557 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
SRP54-208ENST00000555557 A0A0G2JND7 137 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 A0A1B0GTW7 788 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 E7ENX8 843 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 MTHFD1P11586 935 aaKnown RBP9.9□□□□□ -0.82
SRP54-208ENST00000555557 F3P13726 295 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 GNSP15586 552 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 EPORP19235 508 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 SERPINB3P29508 390 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 TAP2Q03519 686 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 LCP2Q13094 533 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 VWA5B1Q5TIE3 1220 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 IYDQ6PHW0 289 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 WASH2PQ6VEQ5 465 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 MAVSQ7Z434 540 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 SYVN1Q86TM6 617 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 C11orf74Q86VG3 221 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 NAGSQ8N159 534 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 TCAIMQ8N3R3 496 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 SNX31Q8N9S9 440 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 FAM46DQ8NEK8 389 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 AGAP11Q8TF27 550 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 ATP6V1E2Q96A05 226 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 SKA1Q96BD8 255 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 PRR11Q96HE9 360 aaPredicted RBP9.9□□□□□ -0.82
SRP54-208ENST00000555557 ZC3H10Q96K80 434 aaKnown RBP9.9□□□□□ -0.82
SRP54-208ENST00000555557 CAMK1GQ96NX5 476 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 OR4K3Q96R72 315 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 TRMOQ9BU70 441 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 MENTQ9BUN1 341 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 TRIM55Q9BYV6 548 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 WASH6PQ9NQA3 447 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 UCKL1Q9NWZ5 548 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 TIMM22Q9Y584 194 aa9.9□□□□□ -0.82
SRP54-208ENST00000555557 OR4F21O95013 312 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 TGDSO95455 350 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 MLYCDO95822 493 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 RPN2P04844 631 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 JUNP05412 331 aaKnown RBP9.9□□□□□ -0.83
SRP54-208ENST00000555557 TROVE2P10155 538 aaKnown RBP eCLIP9.9□□□□□ -0.83
SRP54-208ENST00000555557 EPB42P16452 691 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 PNLIPRP1P54315 467 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 AQP5P55064 265 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 ERVPABLB-1P60509 514 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 TBPL1P62380 186 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 GALNT1Q10472 559 aaPredicted RBP9.9□□□□□ -0.83
SRP54-208ENST00000555557 BNIP3Q12983 259 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 TEAD4Q15561 434 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 ZNF528Q3MIS6 628 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 GKAP1Q5VSY0 366 aaPredicted RBP9.9□□□□□ -0.83
SRP54-208ENST00000555557 ICE2Q659A1 982 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 THOC6Q86W42 341 aaKnown RBP9.9□□□□□ -0.83
SRP54-208ENST00000555557 WDR75Q8IWA0 830 aaKnown RBP9.9□□□□□ -0.83
SRP54-208ENST00000555557 LRRC56Q8IYG6 542 aaPredicted RBP9.9□□□□□ -0.83
SRP54-208ENST00000555557 OR4F6Q8NGB9 312 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 OR52E1Q8NGJ3 308 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 OR56A3Q8NH54 315 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 MAPK15Q8TD08 544 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 ATL1Q8WXF7 558 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 GRAMD1AQ96CP6 724 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 CXorf40BQ96DE9 158 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 SEC16BQ96JE7 1060 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 EBF4Q9BQW3 602 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 KLHL14Q9P2G3 628 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 HAO1Q9UJM8 370 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 TRAF6Q9Y4K3 522 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 USH1CQ9Y6N9 552 aa9.9□□□□□ -0.83
SRP54-208ENST00000555557 LRP4O75096 1905 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 PATE3B3GLJ2 98 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 B4DGG1 531 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 ZNF195O14628 629 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 HGSO14964 777 aaPredicted RBP9.89□□□□□ -0.83
SRP54-208ENST00000555557 YY2O15391 372 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 AQP9O43315 295 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 PRAMEF4O60810 478 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 SKAP2O75563 359 aaPredicted RBP9.89□□□□□ -0.83
SRP54-208ENST00000555557 CNR2P34972 360 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 CTSKP43235 329 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 CCNG1P51959 295 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 HNRNPKP61978 463 aaKnown RBP eCLIP9.89□□□□□ -0.83
SRP54-208ENST00000555557 YBX1P67809 324 aaKnown RBP9.89□□□□□ -0.83
SRP54-208ENST00000555557 TRAF3Q13114 568 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 ELOCQ15369 112 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 PDCD2Q16342 344 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms