RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 GPN2Q9H9Y4 310 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 SIRT5Q9NXA8 310 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 SLC6A14Q9UN76 642 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 SZT2Q5T011 3432 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 CCDC88CQ9P219 2028 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 SOBPA7XYQ1 873 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 TAPBPO15533 448 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 VPS4BO75351 444 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 CYP11A1P05108 521 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 PABPC1P11940 636 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 BCKDHAP12694 445 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 AZGP1P25311 298 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 FOXM1Q08050 763 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 ADHFE1Q8IWW8 467 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 CLECL1Q8IZS7 167 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 Q96MT0 163 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 CHCHD6Q9BRQ6 235 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 LRTM1Q9HBL6 345 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 IL37Q9NZH6 218 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 TMEM9Q9P0T7 183 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 OPTCQ9UBM4 332 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF639Q9UID6 485 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 GIT1Q9Y2X7 761 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 DNMT3AQ9Y6K1 912 aaPredicted RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 PNMA8CA0A1B0GUJ8 204 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 ANKRD28O15084 1053 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 ACPPP15309 386 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 PCMT1P22061 227 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 SERPINB1P30740 379 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 RPL9P32969 192 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 TRAF3Q13114 568 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 RBM48Q5RL73 367 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 ADNP2Q6IQ32 1131 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 SERPINA9Q86WD7 417 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 HORMAD1Q86X24 394 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 TTC29Q8NA56 475 aaPredicted RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 TNKS2Q9H2K2 1166 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 MBD1Q9UIS9 605 aaPredicted RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 TESMINQ9Y4I5 508 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 PRAMEF1O95521 474 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 RHOCP08134 193 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 SELENBP1Q13228 472 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 GBX1Q14549 363 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 KLHL17Q6TDP4 642 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 SBSNQ6UWP8 590 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 SELENOMQ8WWX9 145 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 FAM193BQ96PV7 902 aaPredicted RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 MTERF1Q99551 399 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 KCNS3Q9BQ31 491 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 CLPBQ9H078 707 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 EHD1Q9H4M9 534 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 CD84Q9UIB8 345 aa16.66■□□□□ 0.26
PPP4R3A-208ENST00000555462 TULP3O75386 442 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 HOXD8P13378 290 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 S100A3P33764 101 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 LIPAP38571 399 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 SLC26A3P40879 764 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 C11orf74Q86VG3 221 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 ANKRD13BQ86YJ7 626 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 FAM32AQ9Y421 112 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 EFCAB9A8MZ26 197 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 CLDN7O95471 211 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 POU1F1P28069 291 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 KRT20P35900 424 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 GNPDA1P46926 289 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 RUNDC3AQ59EK9 446 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 BEND5Q7L4P6 421 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 TMEM121BQ9BXQ6 578 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 TPK1Q9H3S4 243 aa16.65■□□□□ 0.26
PPP4R3A-208ENST00000555462 OGNP20774 298 aaKnown RBP16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 DGUOKQ16854 277 aa16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 TYSND1Q2T9J0 566 aa16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 CCDC117Q8IWD4 279 aaPredicted RBP16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 TERB1Q8NA31 727 aa16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF382Q96SR6 550 aa16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 TUBA1CQ9BQE3 449 aa16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 DCSTAMPQ9H295 470 aa16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 TLR8Q9NR97 1041 aaKnown RBP16.64■□□□□ 0.26
PPP4R3A-208ENST00000555462 GREB1Q4ZG55 1949 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 HAS3O00219 553 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 TFECO14948 347 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 PDYNP01213 254 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 ST13P50502 369 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 MAP2K5Q13163 448 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 CACHD1Q5VU97 1274 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 ZNF691Q5VV52 312 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 UBE2UQ5VVX9 321 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 TEX26Q8N6G2 289 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 CELF2-AS1Q8N7Q2 184 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 APIPQ96GX9 242 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 KATNAL1Q9BW62 490 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 BEX2Q9BXY8 128 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 AKIP1Q9NQ31 210 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 ARL15Q9NXU5 204 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 ARIH1Q9Y4X5 557 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 TYW5A2RUC4 315 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 IQCA1LA6NCM1 817 aa16.64■□□□□ 0.25
PPP4R3A-208ENST00000555462 IFRD1O00458 451 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms