RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 HNRNPCL3B7ZW38 293 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM189-UBE2V1I3L0A0 370 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 J3QR06 171 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 PDHXO00330 501 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SLC16A5O15375 505 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF217O75362 1048 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ZBTB11O95625 1053 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 HNRNPCL4P0DMR1 293 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 FGF3P11487 239 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 DAOP14920 347 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 KCNA5P22460 613 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 RPS12P25398 132 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 NMBRP28336 390 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 GNL1P36915 607 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 MATR3P43243 847 aaKnown RBP eCLIP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 LIG4P49917 911 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ARSEP51690 589 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 CTSCP53634 463 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 CD81P60033 236 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 FKBP1BP68106 108 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SIRPAP78324 504 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SLC20A2Q08357 652 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TCP10Q12799 353 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 KIF5AQ12840 1032 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 UBE2V1Q13404 147 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SLC39A14Q15043 492 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM266Q2M3C6 531 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 FAM98BQ52LJ0 330 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM35AQ53FP2 167 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 DHRS7BQ6IAN0 325 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SLC30A6Q6NXT4 461 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 INTS8Q75QN2 995 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF534Q76KX8 674 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 HAUS6Q7Z4H7 955 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 LDB1Q86U70 411 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 PM20D2Q8IYS1 436 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 RNF113BQ8IZP6 322 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 C1orf87Q8N0U7 546 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 GUF1Q8N442 669 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SLC5A8Q8N695 610 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 POGLUT1Q8NBL1 392 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SPATA22Q8NHS9 363 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SLC20A1Q8WUM9 679 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SLC44A1Q8WWI5 657 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 RTP4Q96DX8 246 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 CDRT15Q96T59 188 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 HGH1Q9BTY7 390 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 UTP14AQ9BVJ6 771 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SPATC1LQ9H0A9 340 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 MMP27Q9H306 513 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 DENND2DQ9H6A0 471 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 C11orf49Q9H6J7 331 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 GAREM1Q9H706 876 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TDRD3Q9H7E2 651 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 UBTD1Q9HAC8 227 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 CHMP1AQ9HD42 196 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM30AQ9NV96 361 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TAB2Q9NYJ8 693 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 TAS2R14Q9NYV8 317 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SELENONQ9NZV5 590 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 RCC2Q9P258 522 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 LARSQ9P2J5 1176 aaKnown RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 MALT1Q9UDY8 824 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 VDAC3Q9Y277 283 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ACACBO00763 2458 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 COL2A1P02458 1487 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 ATAD5Q96QE3 1844 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 EP300Q09472 2414 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SH3TC1Q8TE82 1336 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 RELNP78509 3460 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 SMCHD1A6NHR9 2005 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 A0A1B0GUL6 1792 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 LAMA1P25391 3075 aa1.47□□□□□ -2.17
PRPF39-208ENST00000554785 A0A1W2PP11 408 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 MAGEA13PA6NCF6 341 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 MAGEB17A8MXT2 336 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 HNRNPCL2B2RXH8 293 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF587BE7ETH6 402 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CLGNO14967 610 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 NDUFS4O43181 175 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZWINTO95229 277 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 BCL10O95999 233 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 AFPP02771 609 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ABCB1P08183 1280 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 VPREB1P12018 145 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 MYOD1P15172 320 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GJA1P17302 382 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CYP2B6P20813 491 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 NR2F2P24468 414 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CCND3P30281 292 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 USP8P40818 1118 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ISL1P61371 349 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 COG7P83436 770 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 EEF1A2Q05639 463 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SNTA1Q13424 505 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF234Q14588 700 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 RASA2Q15283 850 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CCDC96Q2M329 555 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 KIF19Q2TAC6 998 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 KRTAP24-1Q3LI83 254 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms