RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 JCHAINP01591 159 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GNAO1P09471 354 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SMIM10L1P0DMW3 83 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 YWHAQP27348 245 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HTR1BP28222 390 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TSFMP43897 325 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PRLHRP49683 370 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 DAPP51397 102 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 EPHA4P54764 986 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 FCGRTP55899 365 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 AP1S2P56377 157 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MXRA7P84157 204 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RHAGQ02094 409 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PDAP1Q13442 181 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MAD2L1BPQ15013 274 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PON2Q15165 354 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CNGA3Q16281 694 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CCL14Q16627 93 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HIST2H2ACQ16777 129 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MEP1AQ16819 746 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 AAK1Q2M2I8 961 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MPEG1Q2M385 716 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MMEL1Q495T6 779 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 NOMO2Q5JPE7 1267 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HP1BP3Q5SSJ5 553 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HEPHL1Q6MZM0 1159 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 KIAA1161Q6NSJ0 714 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MRNIPQ6NTE8 343 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TPGS1Q6ZTW0 290 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SLC46A3Q7Z3Q1 461 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 DEFB132Q7Z7B7 95 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF554Q86TJ5 538 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CEP57Q86XR8 500 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HIPK1Q86Z02 1210 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MICU2Q8IYU8 434 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 AFAP1L2Q8N4X5 818 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ARIH2OSQ8N7S6 290 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TEX19Q8NA77 164 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZBTB8BQ8NAP8 495 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 POGLUT1Q8NBL1 392 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RHOXF1Q8NHV9 184 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SCAMP5Q8TAC9 235 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 FLVCR1-AS1Q8TAF5 88 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LKAAEAR1Q8TD35 194 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HAVCR2Q8TDQ0 301 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 EME1Q96AY2 570 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 REPS1Q96D71 796 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TMA16Q96EY4 203 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RMND5BQ96G75 393 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SMIM10Q96HG1 83 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZFP42Q96MM3 310 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CMTM3Q96MX0 182 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 NUF2Q9BZD4 464 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ACPTQ9BZG2 426 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CENPHQ9H3R5 247 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SPON1Q9HCB6 807 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SCHIP1Q9P0W5 487 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 KLHL8Q9P2G9 620 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 EBF1Q9UH73 591 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PCDHGA6Q9Y5G7 932 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 IQCMA0A1B0GVH7 501 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GPR89AB7ZAQ6 455 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HOXC11O43248 304 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HOXA2O43364 376 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 FAM20BO75063 409 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SUPT3HO75486 399 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GRAP2O75791 330 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MYO1DO94832 1006 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ALOX5P09917 674 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GPR89BP0CG08 455 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LPOP22079 712 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GGT2P36268 569 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PIK3CBP42338 1070 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SHC2P98077 582 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LIPEQ05469 1076 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 KDSRQ06136 332 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CLPPQ16740 277 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 UGT8Q16880 541 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 FLYWCH1Q4VC44 716 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ENTPD8Q5MY95 495 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ADGRF1Q5T601 910 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MARC1Q5VT66 337 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF470Q6ECI4 717 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MRM1Q6IN84 353 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 FAM71E1Q6IPT2 247 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CYP20A1Q6UW02 462 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TMEM64Q6YI46 380 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TMEM184AQ6ZMB5 413 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ANKS3Q6ZW76 656 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 C11orf96Q7Z7L8 435 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CDH24Q86UP0 819 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CYP4Z1Q86W10 505 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 THEM5Q8N1Q8 247 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 POU5F2Q8N7G0 328 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 DENND6BQ8NEG7 585 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 S100ZQ8WXG8 99 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 STARD8Q92502 1023 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RNF166Q96A37 237 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SCRN2Q96FV2 425 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms