RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 ZNF558Q96NG5 402 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 XPO6Q96QU8 1125 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 CDK5RAP1Q96SZ6 601 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PAFAH2Q99487 392 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 EBNA1BP2Q99848 306 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 SELENOSQ9BQE4 189 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 CLSTN3Q9BQT9 956 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 NAT9Q9BTE0 207 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PHF7Q9BWX1 381 aaPredicted RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 GBA3Q9H227 469 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PRDM13Q9H4Q3 707 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 C11orf49Q9H6J7 331 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 TRIM36Q9NQ86 728 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 INTS9Q9NV88 658 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 TBK1Q9UHD2 729 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 BAG5Q9UL15 447 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 SNX10Q9Y5X0 201 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 MYO7AQ13402 2215 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 MYOFQ9NZM1 2061 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 TMEM120BA0PK00 339 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 GMNCA6NCL1 334 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 ERICH4A6NGS2 130 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 A8MVJ9 347 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 E9PAM4 449 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 F5H0A9 414 aaPredicted RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 NDUFAB1O14561 156 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 MUSKO15146 869 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PRPF4O43172 522 aaKnown RBP eCLIP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 ADAM12O43184 909 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 AP2A1O95782 977 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 C1QAP02745 245 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 CSF2RAP15509 400 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 LAG3P18627 525 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PRKCHP24723 683 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 DDX6P26196 483 aaKnown RBP eCLIP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 RPL15P61313 204 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 WDR5P61964 334 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 EFEMP1Q12805 493 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PRKG2Q13237 762 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 ST3GAL2Q16842 350 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 LRRC26Q2I0M4 334 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 KBTBD12Q3ZCT8 623 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 MS4A13Q5J8X5 152 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 C10orf120Q5SQS8 335 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 STEAP4Q687X5 459 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 KCTD11Q693B1 232 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 RWDD4Q6NW29 188 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PID1Q7Z2X4 250 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 NLRP14Q86W24 1093 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 LRRC6Q86X45 466 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 P3H2Q8IVL5 708 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 KLHDC8BQ8IXV7 354 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 GPR65Q8IYL9 337 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 ZNF683Q8IZ20 524 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 SLC39A11Q8N1S5 342 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 UMODL1-AS1Q8N2C9 162 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 RTL3Q8N8U3 475 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 ATP6V0D2Q8N8Y2 350 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 GSDMBQ8TAX9 411 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 DCAKDQ8WVC6 231 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 SLC44A1Q8WWI5 657 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 EDAQ92838 391 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 CTHRC1Q96CG8 243 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PRR11Q96HE9 360 aaPredicted RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 PPP1R2P1Q96PQ5 205 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 ADOQ96SZ5 270 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 DPCDQ9BVM2 203 aaPredicted RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 SEPT10Q9P0V9 454 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 KLHL8Q9P2G9 620 aaPredicted RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 STK39Q9UEW8 545 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 HBS1LQ9Y450 684 aaKnown RBP4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 TTLL3Q9Y4R7 772 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 IKBKGQ9Y6K9 419 aa4.7□□□□□ -1.66
PPP4R3A-204ENST00000554574 CCDC187A0A096LP49 1063 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 FAM47DPA6NHR8 397 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 ARHGAP42A6NI28 874 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 UNC119BA6NIH7 251 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 MBD3L5A6NJ08 208 aaPredicted RBP4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 SAC3D1A6NKF1 404 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 SDR42E2A6NKP2 422 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 AP3B1O00203 1094 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 PEX12O00623 359 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 MATN3O15232 486 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 NKX2-8O15522 239 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 CACNG3O60359 315 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 MOCS2O96007 188 aaPredicted RBP4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 IL6RP08887 468 aaPredicted RBP4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 CSH1P0DML2 217 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 CSH2P0DML3 217 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 ACP5P13686 325 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 CCNB1P14635 433 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 CREB1P16220 341 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 NR4A1P22736 598 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 ITGB8P26012 769 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 PGM1P36871 562 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 GRIA1P42261 906 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 MSH2P43246 934 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 IFNAR2P48551 515 aa4.69□□□□□ -1.66
PPP4R3A-204ENST00000554574 DGKQP52824 942 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms