RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TRUB2O95900 331 aaKnown RBP4.61□□□□□ -1.67
SCFD1-211ENST00000554437 PATE4P0C8F1 98 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 PRSS56P0CW18 603 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 DESP17661 470 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 EEF1DP29692 281 aaKnown RBP4.61□□□□□ -1.67
SCFD1-211ENST00000554437 SLC6A6P31641 620 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF75DP51815 510 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 CRIP2P52943 208 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-211ENST00000554437 PDX1P52945 283 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 RBP5P82980 135 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 AIMP1Q12904 312 aaKnown RBP4.61□□□□□ -1.67
SCFD1-211ENST00000554437 HSPB3Q12988 150 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 IL11RAQ14626 422 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 TATDN1Q6P1N9 297 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 CNSTQ6PJW8 725 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 C15orf39Q6ZRI6 1047 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 SH2D5Q6ZV89 423 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 UNC45BQ8IWX7 931 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 CCDC170Q8IYT3 715 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 ARHGAP24Q8N264 748 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 TRIML1Q8N9V2 468 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF383Q8NA42 475 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 FAM76AQ8TAV0 307 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 TEKT4Q8WW24 435 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 SLAMF9Q96A28 289 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 SPDL1Q96EA4 605 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF830Q96NB3 372 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-211ENST00000554437 A4GALTQ9NPC4 353 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 TAB2Q9NYJ8 693 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 B3GAT1Q9P2W7 334 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 ANAPC2Q9UJX6 822 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 KCNJ14Q9UNX9 436 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 IGLV9-49A0A0B4J1Y8 123 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 TOMM70O94826 608 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 SLU7O95391 586 aaKnown RBP4.6□□□□□ -1.67
SCFD1-211ENST00000554437 ATP5BP06576 529 aaKnown RBP4.6□□□□□ -1.67
SCFD1-211ENST00000554437 CD48P09326 243 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 ITGA3P26006 1051 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 CEACAM8P31997 349 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-211ENST00000554437 AP1B1Q10567 949 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 TFCP2Q12800 502 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 KYNUQ16719 465 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 LETM2Q2VYF4 491 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 ARHGAP11AQ6P4F7 1023 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 CAMKMTQ7Z624 323 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 RPAINQ86UA6 219 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 THNSL1Q8IYQ7 743 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 TRIM58Q8NG06 486 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 FGFBP3Q8TAT2 258 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 GDAP1Q8TB36 358 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 GRHL3Q8TE85 626 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 IRGQQ8WZA9 623 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF653Q96CK0 615 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 SFXN2Q96NB2 322 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 FNBP1Q96RU3 617 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 SEPHS2Q99611 448 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 S1PR5Q9H228 398 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 SIX2Q9NPC8 291 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 OLAHQ9NV23 265 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 INTS10Q9NVR2 710 aaKnown RBP4.6□□□□□ -1.67
SCFD1-211ENST00000554437 MTUS1Q9ULD2 1270 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 KIAA1210Q9ULL0 1709 aa4.6□□□□□ -1.67
SCFD1-211ENST00000554437 TCRBV21S2A2A0A5A6 115 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 FEZF1A0PJY2 475 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 TMEM221A6NGB7 291 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 HHLA1C9JL84 531 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 PSMA7O14818 248 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 PRKRAO75569 313 aaKnown RBP4.59□□□□□ -1.67
SCFD1-211ENST00000554437 PSMD10O75832 226 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 WDPCPO95876 746 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 LINGO3P0C6S8 592 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 FRMD6-AS1P0C7T7 363 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 PLA2G4BP0C869 781 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 MAP2K2P36507 400 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 CAPZA2P47755 286 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 CCR3P51677 355 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 RAD23AP54725 363 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 KCNJ10P78508 379 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 SNTB1Q13884 538 aaKnown RBP4.59□□□□□ -1.67
SCFD1-211ENST00000554437 TAF13Q15543 124 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 TCP11X2Q5H9J9 407 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 C9orf152Q5JTZ5 239 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 ARHGAP17Q68EM7 881 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 FAM53AQ6NSI3 398 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-211ENST00000554437 C11orf88Q6PI97 169 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 APLFQ8IW19 511 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF843Q8N446 348 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 TMCO5AQ8N6Q1 288 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 TC2NQ8N9U0 490 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 SPC24Q8NBT2 197 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 OLIG1Q8TAK6 271 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 CCDC107Q8WV48 283 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 LGALS12Q96DT0 336 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 CCDC43Q96MW1 224 aaKnown RBP4.59□□□□□ -1.67
SCFD1-211ENST00000554437 STK36Q9NRP7 1315 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 SERINC1Q9NRX5 453 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 SLC24A2Q9UI40 661 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 ZDHHC2Q9UIJ5 367 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 PADI2Q9Y2J8 665 aa4.59□□□□□ -1.67
SCFD1-211ENST00000554437 RIPK3Q9Y572 518 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms