RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 OR2L8Q8NGY9 312 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 HMGCLL1Q8TB92 370 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 MAIP1Q8WWC4 291 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 DLG3Q92796 817 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 N4BP2L2Q92802 583 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 TRIM44Q96DX7 344 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 FER1L6-AS2Q96M78 137 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF778Q96MU6 729 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 GBP5Q96PP8 586 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PANX3Q96QZ0 392 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 NAP1L3Q99457 506 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 SMAD5Q99717 465 aaKnown RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 NRTNQ99748 197 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 RAB11FIP5Q9BXF6 653 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 IL22Q9GZX6 179 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 KLHL25Q9H0H3 589 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 RAB6BQ9NRW1 208 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 TREX1Q9NSU2 369 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CATSPERZQ9NTU4 200 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 INTS7Q9NVH2 962 aaKnown RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 SPHK1Q9NYA1 384 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 SLC2A6Q9UGQ3 507 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 ANAPC5Q9UJX4 755 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PLCL2Q9UPR0 1127 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CDYLQ9Y232 598 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PLAAQ9Y263 795 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 MAP4K5Q9Y4K4 846 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 MRFAP1Q9Y605 127 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CACNA1DQ01668 2161 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 RELNP78509 3460 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TTLL8A6PVC2 850 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ISM1B1AKI9 464 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TARM1B6A8C7 271 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 KIF2AO00139 706 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 CD3EAPO15446 510 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ALBP02768 609 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 CBSLP0DN79 551 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ETS1P14921 441 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 CD9P21926 228 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 AOAHP28039 575 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 RPL22P35268 128 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 CBSP35520 551 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 FOLR3P41439 243 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 GRIA1P42261 906 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 NPY2RP49146 381 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ARSFP54793 590 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 MLLT10P55197 1068 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ADARP55265 1226 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 DCDP81605 110 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 CDK16Q00536 496 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 HSPA14Q0VDF9 509 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 CHAF1BQ13112 559 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ATP1A4Q13733 1029 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 GRB7Q14451 532 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 SEMA3AQ14563 771 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 BRD3Q15059 726 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TMED2Q15363 201 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 SIX1Q15475 284 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 NADK2Q4G0N4 442 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ZC3H12BQ5HYM0 836 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 VWA5B1Q5TIE3 1220 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 JMJD6Q6NYC1 403 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 MRPL14Q6P1L8 145 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 IGFL3Q6UXB1 125 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TRIM73Q86UV7 250 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TAB3Q8N5C8 712 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF655Q8N720 491 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 EFCAB3Q8N7B9 438 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 FDCSPQ8NFU4 85 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 CPT1CQ8TCG5 803 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 C1orf54Q8WWF1 131 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 PNPLA2Q96AD5 504 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ZUFSPQ96AP4 578 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 FKBP10Q96AY3 582 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 PTERQ96BW5 349 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 PBKQ96KB5 322 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF285Q96NJ3 590 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 PSMG3-AS1Q96PY0 264 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TCF12Q99081 682 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 NDC1Q9BTX1 674 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 NUDT9Q9BW91 350 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 SPRTNQ9H040 489 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 P2RY12Q9H244 342 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 SLC26A1Q9H2B4 701 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 WDR54Q9H977 334 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 MRM3Q9HC36 420 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 HOMER3Q9NSC5 361 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TXLNGQ9NUQ3 528 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 EURLQ9NYK6 297 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 GPR83Q9NYM4 423 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 BFARQ9NZS9 450 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 NDOR1Q9UHB4 597 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 GPN3Q9UHW5 284 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TTC7AQ9ULT0 858 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 TDRKHQ9Y2W6 561 aaKnown RBP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 KLK4Q9Y5K2 254 aa6.36□□□□□ -1.39
SLIRP-203ENST00000554074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
SLIRP-203ENST00000554074 DOPEY1Q5JWR5 2465 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 A0A1B0GX78 115 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms