RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PPP1CAP62136 330 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 NAA25Q14CX7 972 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 ST3GAL2Q16842 350 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 KIF26BQ2KJY2 2108 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.966e-51■■■■■ 227.8
CHD8-206ENST00000553870 RBM20Q5T481 1227 aaKnown RBP9.03□□□□□ -0.96
CHD8-206ENST00000553870 LRRC69Q6ZNQ3 347 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 CAPN12Q6ZSI9 719 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 CCDC91Q7Z6B0 441 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 CPNE9Q8IYJ1 553 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 MYO1HQ8N1T3 1032 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 LINC01555Q8NAE3 123 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 EEF1AKMT1Q8WVE0 214 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 ZUFSPQ96AP4 578 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 TCTN2Q96GX1 697 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 CCDC138Q96M89 665 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 TRAPPC9Q96Q05 1148 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 OR2A14Q96R47 310 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 TRIM54Q9BYV2 358 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 PARVBQ9HBI1 364 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 SMYD2Q9NRG4 433 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 INTS7Q9NVH2 962 aaKnown RBP9.03□□□□□ -0.96
CHD8-206ENST00000553870 KLK4Q9Y5K2 254 aa9.03□□□□□ -0.96
CHD8-206ENST00000553870 URB1O60287 2271 aaKnown RBP9.03□□□□□ -0.96
CHD8-206ENST00000553870 ACACAQ13085 2346 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 A0A0J9YY10 115 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 PMS2P1A4D2B8 440 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 SLC9B1P1A6NJY1 282 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 SRRM3A6NNA2 597 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 ARHGEF33A8MVX0 844 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 CXorf49A8MYA2 514 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 TARM1B6A8C7 271 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 C9orf172C9J069 976 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 STMND1H3BQB6 276 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 PRICKLE3O43900 615 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 PRAMEF10O60809 474 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 TSPAN12O95859 305 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 F7P08709 466 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 ENO2P09104 434 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 HIST1H2AGP0C0S8 130 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 RHOXF2BP0C7M4 288 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 UGT2B7P16662 529 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 HIST1H2ADP20671 130 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 OAS2P29728 719 aaKnown RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 BDKRB1P46663 353 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 AP1S2P56377 157 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 TAS2R39P59534 338 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 RELAQ04206 551 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 FOXM1Q08050 763 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 MAP7Q14244 749 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 KBTBD12Q3ZCT8 623 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 UBE2R2Q712K3 238 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 TRMT10CQ7L0Y3 403 aaKnown RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 PIWIL4Q7Z3Z4 852 aaKnown RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 PPP1R3BQ86XI6 285 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 CTAGE3PQ8IX95 158 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 PPM1NQ8N819 430 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 LMNTD1Q8N9Z9 388 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 FLVCR1-AS1Q8TAF5 88 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 KCNE4Q8WWG9 221 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 SMPDL3AQ92484 453 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 LINGO1Q96FE5 620 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 ELMO2Q96JJ3 720 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 HIST1H2AHQ96KK5 128 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 OR6C1Q96RD1 312 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 PKP4Q99569 1192 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 GPR22Q99680 433 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 RBBP8Q99708 897 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 HIST1H2AJQ99878 128 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 RHOXF2Q9BQY4 288 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 H2AFJQ9BTM1 129 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 SPRY4Q9C004 299 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 PCBD2Q9H0N5 130 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 ACSS3Q9H6R3 686 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 FANCEQ9HB96 536 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 SPHK1Q9NYA1 384 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 NINJ2Q9NZG7 142 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 SLC17A6Q9P2U8 582 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 SERTAD3Q9UJW9 196 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 RARRES3Q9UL19 164 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 PLAGL1Q9UM63 463 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 NFU1Q9UMS0 254 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 NOVA2Q9UNW9 492 aaKnown RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 TMEM184BQ9Y519 407 aaPredicted RBP9.02□□□□□ -0.97
CHD8-206ENST00000553870 B3GALT1Q9Y5Z6 326 aa9.02□□□□□ -0.97
CHD8-206ENST00000553870 CHD8Q9HCK8 2581 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 CCDC189A1A4V9 331 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 PABPN1LA6NDY0 278 aaKnown RBP9.01□□□□□ -0.97
CHD8-206ENST00000553870 E7ENX8 843 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 MT-ND3P03897 115 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 LIPCP11150 499 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 FOLR1P15328 257 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 ST6GAL1P15907 406 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 STMN1P16949 149 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 ZNF37AP17032 561 aaPredicted RBP9.01□□□□□ -0.97
CHD8-206ENST00000553870 CCND1P24385 295 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 HRH2P25021 359 aa9.01□□□□□ -0.97
CHD8-206ENST00000553870 CRABP2P29373 138 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms