RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DOK6Q6PKX4 331 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 FRA10AC1Q70Z53 315 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 GPSM1Q86YR5 675 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 C10orf107Q8IVU9 208 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 HM13Q8TCT9 377 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 FUBP1Q96AE4 644 aaKnown RBP14.11□□□□□ -0.15
SHMT2-208ENST00000553868 PTERQ96BW5 349 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 DEPDC7Q96QD5 511 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 MECRQ9BV79 373 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 TRIM54Q9BYV2 358 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 UNKQ9C0B0 810 aaKnown RBP14.11□□□□□ -0.15
SHMT2-208ENST00000553868 CAAP1Q9H8G2 361 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 OXSMQ9NWU1 459 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 OR1A2Q9Y585 309 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 LRRK1Q38SD2 2015 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 ITPR3Q14573 2671 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 NPEPPSL1A6NEC2 478 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 MGAT4DA6NG13 374 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 TMEM114B3SHH9 223 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SUPT3HB4E1H0 165 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 C10orf142B7Z368 130 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 CDC7O00311 574 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SLC16A5O15375 505 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 YKT6O15498 198 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 GRID2O43424 1007 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SNX2O60749 519 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 KCNJ13O60928 360 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SUPT3HO75486 399 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 GPC4O75487 556 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 POP7O75817 140 aaKnown RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 IPO13O94829 963 aaKnown RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SLCO2B1O94956 709 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 ENO2P09104 434 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 POU3F2P20265 443 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 CD38P28907 300 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 PBLDP30039 288 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SERPINB5P36952 375 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 DAB2P98082 770 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 RPA4Q13156 261 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 NFATC4Q14934 902 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 OR4D1Q15615 310 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 TSNQ15631 228 aaKnown RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 CRTC3Q6UUV7 619 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 PIWIL4Q7Z3Z4 852 aaKnown RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 CPLX4Q7Z7G2 160 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 AMZ2Q86W34 360 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SPATS2Q86XZ4 545 aaKnown RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 PTRH1Q86Y79 214 aaKnown RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 TMEM151AQ8N4L1 468 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 OR2L2Q8NH16 312 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 NAT14Q8WUY8 206 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SKA2Q8WVK7 121 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 GRAMD1AQ96CP6 724 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 FOPNLQ96NB1 174 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 ZNF317Q96PQ6 595 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-208ENST00000553868 ATOH8Q96SQ7 321 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 MYOCQ99972 504 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 FZD3Q9NPG1 666 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 NUDT4Q9NZJ9 180 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 SLC17A4Q9Y2C5 497 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 TMEM98Q9Y2Y6 226 aa14.1□□□□□ -0.15
SHMT2-208ENST00000553868 TRPM6Q9BX84 2022 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 SLC5A10A0PJK1 596 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 DLX3O60479 287 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 FAM107AO95990 144 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 SBK3P0C264 359 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 GFAPP14136 432 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 RBMS1P29558 406 aaKnown RBP14.09□□□□□ -0.15
SHMT2-208ENST00000553868 RABIFP47224 123 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 THOP1P52888 689 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 NXPH1P58417 271 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 PFN3P60673 137 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 PTK2BQ14289 1009 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 CFAP157Q5JU67 520 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 CDKL4Q5MAI5 379 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 FOXR1Q6PIV2 292 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 USP53Q70EK8 1073 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 GALNT13Q8IUC8 556 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 LRRC34Q8IZ02 419 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 FBXO39Q8N4B4 442 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 OXR1Q8N573 874 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 FAM26EQ8N5C1 309 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 BEND7Q8N7W2 519 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-208ENST00000553868 PPP4R1Q8TF05 950 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 EXT2Q93063 718 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 SKA1Q96BD8 255 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 PRR11Q96HE9 360 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-208ENST00000553868 WDR92Q96MX6 357 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 SLC46A1Q96NT5 459 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 CCNL2Q96S94 520 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-208ENST00000553868 TIMM29Q9BSF4 260 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 LGR4Q9BXB1 951 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 PITPNM3Q9BZ71 974 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 RDH14Q9HBH5 336 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 THAP1Q9NVV9 213 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 NCKIPSDQ9NZQ3 722 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 CD274Q9NZQ7 290 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 OARD1Q9Y530 152 aa14.09□□□□□ -0.15
SHMT2-208ENST00000553868 LRBAP50851 2863 aa14.08□□□□□ -0.15
SHMT2-208ENST00000553868 A8MT66 165 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms