RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 RASGRP3Q8IV61 690 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 SFRP1Q8N474 314 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 ARL14Q8N4G2 192 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 TEX9Q8N6V9 391 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 AVL9Q8NBF6 648 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 FBXO15Q8NCQ5 510 aaPredicted RBP9.48□□□□□ -0.89
CHD8-204ENST00000553622 OR4E2Q8NGC2 313 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 OR52E1Q8NGJ3 308 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 OR10G6Q8NH81 332 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 SAP25Q8TEE9 199 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 PYCR2Q96C36 320 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 MOCOSQ96EN8 888 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 SLC38A3Q99624 504 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 TMEM79Q9BSE2 394 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 RAB11FIP5Q9BXF6 653 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 ERVK-6Q9BXR3 956 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 ZMYND15Q9H091 742 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 SRMSQ9H3Y6 488 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 KIR3DX1Q9H7L2 352 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 MANSC1Q9H8J5 431 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 PRM3Q9NNZ6 103 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 SLC40A1Q9NP59 571 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 POT1Q9NUX5 634 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 NLGN3Q9NZ94 848 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 OPTCQ9UBM4 332 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 PTBP2Q9UKA9 531 aaKnown RBP9.48□□□□□ -0.89
CHD8-204ENST00000553622 ICKQ9UPZ9 632 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 HCN4Q9Y3Q4 1203 aa9.48□□□□□ -0.89
CHD8-204ENST00000553622 ZNF839A8K0R7 811 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 TCP11X1B4DZS4 312 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 TRIM38O00635 465 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 TAPBPO15533 448 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 KLK8O60259 260 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 NOBOXO60393 691 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 H2AFYO75367 372 aaKnown RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 STK16O75716 305 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 HSPA4LO95757 839 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 SERPINE1P05121 402 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 ZNF806P0C7X5 589 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 IMPDH1P20839 514 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 PKLRP30613 574 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 SHMT2P34897 504 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 HSD17B2P37059 387 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 CCR10P46092 362 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 RAB28P51157 221 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 CDH13P55290 713 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 DNAJB13P59910 316 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 TBPL1P62380 186 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 GNGT1P63211 74 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 UBE2IP63279 158 aaKnown RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 NFKB2Q00653 900 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 FASTKQ14296 549 aaKnown RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 GRB7Q14451 532 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 PDK4Q16654 411 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 PTCHD3Q3KNS1 767 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 AASDHQ4L235 1098 aaPredicted RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 UNC50Q53HI1 259 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 CDKL4Q5MAI5 379 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 ZNF678Q5SXM1 525 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 ATG16L1Q676U5 607 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 ANKS6Q68DC2 871 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 CAPN13Q6MZZ7 669 aaPredicted RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 ARMC6Q6NXE6 501 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 SUSD1Q6UWL2 747 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 TMEM26Q6ZUK4 368 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 ARL10Q8N8L6 244 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 SETD7Q8WTS6 366 aaKnown RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 ZNF480Q8WV37 535 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 CKAP2Q8WWK9 683 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 ZNF75CPQ92670 426 aaPredicted RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 ATP6V1E2Q96A05 226 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 MAGEB18Q96M61 343 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 NSUN5Q96P11 429 aaKnown RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 EDEM2Q9BV94 578 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 DUSP23Q9BVJ7 150 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 GATA5Q9BWX5 397 aaPredicted RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 CAPS2Q9BXY5 557 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 SHCBP1LQ9BZQ2 653 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 CD244Q9BZW8 370 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 SEMA4BQ9NPR2 832 aaPredicted RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 CCDC177Q9NQR7 707 aaPredicted RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 SPATA7Q9P0W8 599 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 ASB1Q9Y576 335 aa9.47□□□□□ -0.89
CHD8-204ENST00000553622 TNPO3Q9Y5L0 923 aaKnown RBP9.47□□□□□ -0.89
CHD8-204ENST00000553622 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.89
CHD8-204ENST00000553622 CPED1A4D0V7 1026 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 GSAPA4D1B5 854 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 OR6C74A6NCV1 312 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 ISM1B1AKI9 464 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 K7EPI3 171 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 GIPC1O14908 333 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 CLGNO14967 610 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 SIGLEC6O43699 453 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 CRCPO75575 148 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 LYPLA1O75608 230 aaPredicted RBP9.46□□□□□ -0.9
CHD8-204ENST00000553622 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.9
CHD8-204ENST00000553622 RPS17P08708 135 aaKnown RBP9.46□□□□□ -0.9
CHD8-204ENST00000553622 TYRP1P17643 537 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 AMD1P17707 334 aa9.46□□□□□ -0.9
CHD8-204ENST00000553622 GRK2P25098 689 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms