RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ADAM15Q13444 863 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 CAMK2GQ13555 558 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 BOP1Q14137 746 aaKnown RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 PHKG1Q16816 387 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 ZNF423Q2M1K9 1284 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 PLA2G4EQ3MJ16 856 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 C6orf136Q5SQH8 315 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 LIPJQ5W064 366 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 REP15Q6BDI9 236 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 LETMD1Q6P1Q0 360 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 ADAMTSL4Q6UY14 1074 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 RPS27LQ71UM5 84 aaKnown RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 TRMT11Q7Z4G4 463 aaKnown RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 KBTBD6Q86V97 674 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 CDYL2Q8N8U2 506 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 L3MBTL4Q8NA19 623 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 FNDC5Q8NAU1 212 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 OR52B6Q8NGF0 335 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 CXorf40AQ8TE69 158 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 GDPD5Q8WTR4 605 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 USP7Q93009 1102 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 SCAMP4Q969E2 229 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 NXPE3Q969Y0 559 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 RSRC1Q96IZ7 334 aaKnown RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 C3orf30Q96M34 536 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 CDRT15Q96T59 188 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 FAM129BQ96TA1 746 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 ZBTB18Q99592 522 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 TMEM79Q9BSE2 394 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 TRIM15Q9C019 465 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 RSPH9Q9H1X1 276 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 CD248Q9HCU0 757 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 S100A14Q9HCY8 104 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 PRSS16Q9NQE7 514 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 DNAJC11Q9NVH1 559 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 GPRC5BQ9NZH0 403 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 C6orf203Q9P0P8 240 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 TMEM181Q9P2C4 612 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 LEF1Q9UJU2 399 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-221ENST00000553498 ZNF225Q9UK10 706 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 MAPRE3Q9UPY8 281 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 L3MBTL1Q9Y468 752 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 BPTFQ12830 3046 aa7.13□□□□□ -1.27
ATXN3-221ENST00000553498 LRRC14BA6NHZ5 514 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 M0R082 166 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 LSM1O15116 133 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CFLARO15519 480 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 PEX1O43933 1283 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 SYNCRIPO60506 623 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 TBX10O75333 385 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 EEDO75530 441 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 GUCA1CO95843 209 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 RPN2P04844 631 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 EPHX1P07099 455 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 PRPS2P11908 318 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 C6P13671 934 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 HSD17B1P14061 328 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ANPEPP15144 967 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ACADSP16219 412 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 HSD17B2P37059 387 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ARL1P40616 181 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 P2RY2P41231 377 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 HNF4AP41235 474 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CASP2P42575 452 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 GPR1P46091 355 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 POLR2JP52435 117 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CSTF3Q12996 717 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 MAP7Q14244 749 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 FLOT2Q14254 428 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 TRIM25Q14258 630 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 GRB7Q14451 532 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 AP5B1Q2VPB7 878 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CACHD1Q5VU97 1274 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 SDE2Q6IQ49 451 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 IL27RAQ6UWB1 636 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 UNC5DQ6UXZ4 953 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 LRRC74BQ6ZQY2 392 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 GK5Q6ZS86 529 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 Q6ZSR9 355 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 RFLNAQ6ZTI6 216 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 MSANTD1Q6ZTZ1 278 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 LPCAT2Q7L5N7 544 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 HPS6Q86YV9 775 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 FUNDC1Q8IVP5 155 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 AADATQ8N5Z0 425 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 DPP10Q8N608 796 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 RASGEF1AQ8N9B8 481 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CATSPER1Q8NEC5 780 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ZNF417Q8TAU3 575 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 HMGCLL1Q8TB92 370 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 HM13Q8TCT9 377 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 SKA2Q8WVK7 121 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ASB12Q8WXK4 309 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 STARD8Q92502 1023 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 FAM131CQ96AQ9 280 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ARRDC3Q96B67 414 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 REPS1Q96D71 796 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 SPDL1Q96EA4 605 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms