RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 RBM43Q6ZSC3 357 aaKnown RBP7.04□□□□□ -1.28
ATXN3-219ENST00000553488 REC114Q7Z4M0 266 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 PPP1R32Q7Z5V6 425 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 CDH24Q86UP0 819 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 ZC3H18Q86VM9 953 aaKnown RBP7.04□□□□□ -1.28
ATXN3-219ENST00000553488 MFSD4AQ8N468 514 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 TTC30BQ8N4P2 665 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 PLD5Q8N7P1 536 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 FBXO27Q8NI29 283 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 PPP4R1Q8TF05 950 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 C12orf66Q96MD2 445 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 IP6K3Q96PC2 410 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 NRTNQ99748 197 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 SLX1AQ9BQ83 275 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 WDR77Q9BQA1 342 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-219ENST00000553488 GPR63Q9BZJ6 419 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 XPO4Q9C0E2 1151 aaKnown RBP7.04□□□□□ -1.28
ATXN3-219ENST00000553488 WWP1Q9H0M0 922 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 THAP2Q9H0W7 228 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 FANCEQ9HB96 536 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 SYTL2Q9HCH5 934 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 BPIFA1Q9NP55 256 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 IL26Q9NPH9 171 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 SMOXQ9NWM0 555 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 P4HTMQ9NXG6 502 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 AIPL1Q9NZN9 384 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 ANAPC7Q9UJX3 599 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 OSGIN2Q9Y236 505 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 PADI2Q9Y2J8 665 aa7.04□□□□□ -1.28
ATXN3-219ENST00000553488 HEATR9A2RTY3 570 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 OR2AG2A6NM03 316 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 C9J4A7 227 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 PRSS44E7EML9 344 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 PAX4O43316 350 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 ZNF749O43361 778 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 SGTAO43765 313 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 DNAJA2O60884 412 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 IPO13O94829 963 aaKnown RBP7.03□□□□□ -1.28
ATXN3-219ENST00000553488 NDST3O95803 873 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 BPNT1O95861 308 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 MT-CYBP00156 380 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-219ENST00000553488 UMODP07911 640 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 STSP08842 583 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 CBSLP0DN79 551 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 JUNBP17275 347 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-219ENST00000553488 POLR2CP19387 275 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-219ENST00000553488 CYP2A7P20853 494 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 CDH3P22223 829 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 PBLDP30039 288 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-219ENST00000553488 CBSP35520 551 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 GJC1P36383 396 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 KIR3DL1P43629 444 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 GLRBP48167 497 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 GABRA4P48169 554 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 LMAN1P49257 510 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 MYL5Q02045 173 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 ADCY2Q08462 1091 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 XRCC4Q13426 336 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 SSPNQ14714 243 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 NOMO1Q15155 1222 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 LDLRAP1Q5SW96 308 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 GPRC6AQ5T6X5 926 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 SP5Q6BEB4 398 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-219ENST00000553488 TMEM220Q6QAJ8 160 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 IGFL2Q6UWQ7 119 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 CDHR3Q6ZTQ4 885 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 ZADH2Q8N4Q0 377 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 CLEC1AQ8NC01 280 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 ANKRD20A12PQ8NF67 263 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 OR2Y1Q8NGV0 311 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 GDAP1Q8TB36 358 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 BRSK1Q8TDC3 778 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 GRHL3Q8TE85 626 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 NAT14Q8WUY8 206 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 ZFPM2Q8WW38 1151 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 TM9SF4Q92544 642 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 LURAP1Q96LR2 239 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 Q96M66 194 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 FER1L6-AS2Q96M78 137 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 OLFM3Q96PB7 478 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 GBP5Q96PP8 586 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 SLC25A51Q9H1U9 297 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 AGPAT4Q9NRZ5 378 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 IL17CQ9P0M4 197 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 IP6K2Q9UHH9 426 aa7.03□□□□□ -1.28
ATXN3-219ENST00000553488 A0A1W2PQJ5 194 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 MGAT4DA6NG13 374 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 E7EQ34 232 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 MATN2O00339 956 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 BTN3A3O00478 584 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 BTN3A1O00481 513 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 HCRTR1O43613 425 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 LDB2O43679 373 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 UGT1A9O60656 530 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 KLHL41O60662 606 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ATE1O95260 518 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 HTR3BO95264 441 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 IGHEP01854 428 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 CYP1A2P05177 515 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 SKILP12757 684 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms