RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CYP2A13Q16696 494 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.84■□□□□ 0.45
CPSF2-202ENST00000553427 TMTC4Q5T4D3 741 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 CYHR1Q6ZMK1 362 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 ZC3HC1Q86WB0 502 aaKnown RBP17.84■□□□□ 0.45
CPSF2-202ENST00000553427 ZFAND4Q86XD8 727 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 CPNE9Q8IYJ1 553 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 DENND1AQ8TEH3 1009 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 CDKL2Q92772 493 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 TRAPPC9Q96Q05 1148 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 TSPYL1Q9H0U9 437 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 PDE7BQ9NP56 450 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 DMGDHQ9UI17 866 aaKnown RBP17.84■□□□□ 0.45
CPSF2-202ENST00000553427 SLC39A10Q9ULF5 831 aa17.84■□□□□ 0.45
CPSF2-202ENST00000553427 A0A0J9YY10 115 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 SLC9B1P1A6NJY1 282 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 FAM159BA6NKW6 160 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 KLK10O43240 276 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 MAP3K7O43318 606 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 DLGAP3O95886 979 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 C1QAP02745 245 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 EBLN1P0CF75 366 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 ST6GAL1P15907 406 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 ITPKBP27987 946 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 HSD17B2P37059 387 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 GPX6P59796 221 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 CCSMST1Q4G0I0 132 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 HECTD2Q5U5R9 776 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 BROXQ5VW32 411 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 STRA8Q7Z7C7 330 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 CCDC25Q86WR0 208 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 PPP1R3BQ86XI6 285 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 RELL1Q8IUW5 271 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 OR9A1PQ8NGU1 263 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 NAF1Q96HR8 494 aaKnown RBP17.83■□□□□ 0.44
CPSF2-202ENST00000553427 CTRCQ99895 268 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 RHOJQ9H4E5 214 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 SMYD2Q9NRG4 433 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 FGF21Q9NSA1 209 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 SOHLH2Q9NX45 425 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 PILRAQ9UKJ1 303 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 RARRES3Q9UL19 164 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 VWA7Q9Y334 891 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 SDK2Q58EX2 2172 aa17.83■□□□□ 0.44
CPSF2-202ENST00000553427 PRICKLE3O43900 615 aaPredicted RBP17.82■□□□□ 0.44
CPSF2-202ENST00000553427 STK17BO94768 372 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 MCM3P25205 808 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 STX2P32856 288 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 SP140Q13342 867 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 KCNAB1Q14722 419 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 FBXO38Q6PIJ6 1188 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 PAQR3Q6TCH7 311 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 C3orf62Q6ZUJ4 267 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 PIWIL4Q7Z3Z4 852 aaKnown RBP17.82■□□□□ 0.44
CPSF2-202ENST00000553427 GPATCH11Q8N954 259 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 C19orf47Q8N9M1 422 aaKnown RBP17.82■□□□□ 0.44
CPSF2-202ENST00000553427 IL17FQ96PD4 163 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 FANCEQ9HB96 536 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 LRRC4CQ9HCJ2 640 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 MTRF1LQ9UGC7 380 aaKnown RBP17.82■□□□□ 0.44
CPSF2-202ENST00000553427 LNPEPQ9UIQ6 1025 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 KLK4Q9Y5K2 254 aa17.82■□□□□ 0.44
CPSF2-202ENST00000553427 CHD6Q8TD26 2715 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 ZNF839A8K0R7 811 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 ISM1B1AKI9 464 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 TSPAN12O95859 305 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 C8GP07360 202 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 ATP1A2P50993 1020 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 TMPRSS3P57727 454 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 PDAP1Q13442 181 aaKnown RBP17.81■□□□□ 0.44
CPSF2-202ENST00000553427 NAB1Q13506 487 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 CAPN12Q6ZSI9 719 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 TRIM73Q86UV7 250 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 SNRNP27Q8WVK2 155 aaKnown RBP17.81■□□□□ 0.44
CPSF2-202ENST00000553427 HNRNPLLQ8WVV9 542 aaKnown RBP17.81■□□□□ 0.44
CPSF2-202ENST00000553427 NKD1Q969G9 470 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 ZNF501Q96CX3 271 aaPredicted RBP17.81■□□□□ 0.44
CPSF2-202ENST00000553427 TCTN2Q96GX1 697 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 OLFM1Q99784 485 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 CPNE1Q99829 537 aa17.81■□□□□ 0.44
CPSF2-202ENST00000553427 TSR3Q9UJK0 312 aaKnown RBP17.81■□□□□ 0.44
CPSF2-202ENST00000553427 FAM95CA0A1B0GW59 222 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 CXorf49A8MYA2 514 aaPredicted RBP17.8■□□□□ 0.44
CPSF2-202ENST00000553427 SLC16A5O15375 505 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 ZBTB14O43829 449 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 RAD1O60671 282 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 PVRP15151 417 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 MAP4P27816 1152 aaKnown RBP17.8■□□□□ 0.44
CPSF2-202ENST00000553427 OAS2P29728 719 aaKnown RBP17.8■□□□□ 0.44
CPSF2-202ENST00000553427 ECHS1P30084 290 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 GP5P40197 560 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 IL2P60568 153 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 TGIF1Q15583 401 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 NLGN4XQ8N0W4 816 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 MYO1HQ8N1T3 1032 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 LMNTD1Q8N9Z9 388 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 NLGN4YQ8NFZ3 816 aaPredicted RBP17.8■□□□□ 0.44
CPSF2-202ENST00000553427 EEF1AKMT1Q8WVE0 214 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 LINGO1Q96FE5 620 aa17.8■□□□□ 0.44
CPSF2-202ENST00000553427 PDLIM5Q96HC4 596 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms