RNA–Protein interactions for RNA: ENST00000553024.1

PPP1CC-210, Transcript of protein phosphatase 1 catalytic subunit gamma, humanhuman

TSL 2

Gene PPP1CC, Length 2,797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CC-210ENST00000553024 RAB41Q5JT25 222 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 ZNF648Q5T619 568 aaPredicted RBP6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 DEPDC1Q5TB30 811 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 RAP1GAP2Q684P5 730 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 ANKS6Q68DC2 871 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 PLEKHG7Q6ZR37 379 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 USP43Q70EL4 1123 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 AHSA2Q719I0 299 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 VTCN1Q7Z7D3 282 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 PTRH1Q86Y79 214 aaKnown RBP6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 DCP2Q8IU60 420 aaKnown RBP6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 HID1Q8IV36 788 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 MSRB3Q8IXL7 192 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 DEPDC4Q8N2C3 294 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 SCAIQ8N9R8 606 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 ZNF540Q8NDQ6 660 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 OR4K2Q8NGD2 314 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 ZNF461Q8TAF7 563 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 PROX1Q92786 737 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 FUBP1Q96AE4 644 aaKnown RBP6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 ISG20Q96AZ6 181 aaKnown RBP6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 RHBDF1Q96CC6 855 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 CCDC126Q96EE4 140 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 SLC47A1Q96FL8 570 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 DACH2Q96NX9 599 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 VAT1Q99536 393 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 CGREF1Q99674 301 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 INPP5KQ9BT40 448 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 PRRG3Q9BZD7 231 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 MAGEE1Q9HCI5 957 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 HMG20AQ9NP66 347 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.319e-8■■□□□ 14.3
PPP1CC-210ENST00000553024 CD274Q9NZQ7 290 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 FNIP2Q9P278 1114 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 SUN2Q9UH99 717 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 LEF1Q9UJU2 399 aaPredicted RBP6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 INTS6Q9UL03 887 aaKnown RBP6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 ABCG2Q9UNQ0 655 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 PCDHGA10Q9Y5H3 936 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 GREB1Q4ZG55 1949 aa6.87□□□□□ -1.31
PPP1CC-210ENST00000553024 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 SNPHO15079 494 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 EEDO75530 441 aaKnown RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 FGF4P08620 206 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CHRM5P08912 532 aaPredicted RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 ATXN1LP0C7T5 689 aaKnown RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CDH1P12830 882 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 JUNBP17275 347 aaPredicted RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 TNFRSF1BP20333 461 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 FDXRP22570 491 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 TTKP33981 857 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 BMP8BP34820 402 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 SCNN1AP37088 669 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 LIPAP38571 399 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 KPNA2P52292 529 aaKnown RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 PHC1P78364 1004 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 PPP2R2BQ00005 443 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 UBE3AQ05086 875 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 LCP2Q13094 533 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 DOC2BQ14184 412 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CLCA4Q14CN2 919 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 MARC1Q5VT66 337 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 TPGS2Q68CL5 300 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 KLHL17Q6TDP4 642 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CYP20A1Q6UW02 462 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 ZNF551Q7Z340 670 aaPredicted RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 SCD5Q86SK9 330 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CCDC71Q8IV32 467 aaPredicted RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 EFHBQ8N7U6 833 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 PAPD5Q8NDF8 572 aaKnown RBP6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 ZNF555Q8NEP9 628 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 OR2T12Q8NG77 320 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 OR6Q1Q8NGQ2 317 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 OSCP1Q8WVF1 389 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 ATL1Q8WXF7 558 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 AUTS2Q8WXX7 1259 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 RORBQ92753 470 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.86□□□□□ -1.313e-8■■■■■ 70.6
PPP1CC-210ENST00000553024 LGALS12Q96DT0 336 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CLIP3Q96DZ5 547 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 NRBF2Q96F24 287 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 ZNF599Q96NL3 588 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 SAMD11Q96NU1 681 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 TSGA13Q96PP4 275 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 LRRC3Q9BY71 257 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 TRIM54Q9BYV2 358 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CEP44Q9C0F1 390 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 ROGDIQ9GZN7 287 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 CNGB3Q9NQW8 809 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 SNX6Q9UNH7 406 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 PKP3Q9Y446 797 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 SNX8Q9Y5X2 465 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 IRAK3Q9Y616 596 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 COMMD10Q9Y6G5 202 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 NLRC5Q86WI3 1866 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 PTPRDP23468 1912 aa6.86□□□□□ -1.31
PPP1CC-210ENST00000553024 SMIM30A4D0T7 59 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms