RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 SOAT1P35610 550 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 MTHFRP42898 656 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 NRIP1P48552 1158 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 PSMD8P48556 350 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 MC1RQ01726 317 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 DHCR24Q15392 516 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 C2orf27AQ580R0 203 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 CATSPEREQ5SY80 951 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 PRAMEF9Q5VWM5 478 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 DUS1LQ6P1R4 473 aaKnown RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ANKRD33Q7Z3H0 272 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ADGRD2Q7Z7M1 963 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 METTL25Q8N6Q8 603 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 RMND5BQ96G75 393 aaPredicted RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ASB2Q96Q27 587 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 NR1H4Q96RI1 486 aaPredicted RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 HERC2P3Q9BVR0 1158 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ACPTQ9BZG2 426 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SLC6A17Q9H1V8 727 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ACTL8Q9H568 366 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SGK2Q9HBY8 427 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 CD300AQ9UGN4 299 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SLC8A2Q9UPR5 921 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ERVW-1Q9UQF0 538 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 KLHL20Q9Y2M5 609 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 TNPO3Q9Y5L0 923 aaKnown RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SNX8Q9Y5X2 465 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SCN3AQ9NY46 2000 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 PRRT4C9JH25 899 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 E7EQ34 232 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 STX16O14662 325 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 LSM1O15116 133 aaKnown RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 MITFO75030 526 aaPredicted RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 TULP3O75386 442 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 KCNH1O95259 989 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SLC16A8O95907 504 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 CST1P01037 141 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ALBP02768 609 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 PCCBP05166 539 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 TFAP2AP05549 437 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 NUDT7P0C024 238 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ALPPL2P10696 532 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ADSLP30566 484 aaPredicted RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SUOXP51687 545 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 RPS14P62263 151 aaKnown RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 PHC1P78364 1004 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ACSM2AQ08AH3 577 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 LDLRAP1Q5SW96 308 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 GPR107Q5VW38 600 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ACSM2BQ68CK6 577 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 CCDC81Q6ZN84 652 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 Q6ZNB5 142 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 HTR3DQ70Z44 454 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 OLIG3Q7RTU3 272 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 VTCN1Q7Z7D3 282 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ADGRG5Q8IZF4 528 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 MMP21Q8N119 569 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 DHRSXQ8N5I4 330 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 C1orf52Q8N6N3 182 aaKnown RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 FLCNQ8NFG4 579 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ZFP28Q8NHY6 868 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 FRS2Q8WU20 508 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ABTB1Q969K4 478 aaPredicted RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 TMBIM1Q969X1 311 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 HHIPL1Q96JK4 782 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SAMD11Q96NU1 681 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 PANX1Q96RD7 426 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ZNF382Q96SR6 550 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 HOPXQ9BPY8 73 aaPredicted RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ADI1Q9BV57 179 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 DGCR6LQ9BY27 220 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 TRIM15Q9C019 465 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 XKR8Q9H6D3 395 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 RUBCNLQ9H714 662 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 CARS2Q9HA77 564 aaKnown RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 SUCOQ9UBS9 1254 aaKnown RBP5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ACSL6Q9UKU0 697 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 ZNF236Q9UL36 1845 aa5.45□□□□□ -1.54
LIMA1-215ENST00000552823 FAM234BA2RU67 622 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 WASHC1A8K0Z3 465 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 RFXANKO14593 260 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 RECQL5O94762 991 aaPredicted RBP5.44□□□□□ -1.54
LIMA1-215ENST00000552823 PAK4O96013 591 aaPredicted RBP5.44□□□□□ -1.54
LIMA1-215ENST00000552823 SERPINA1P01009 418 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 HSPA1AP0DMV8 641 aaKnown RBP5.44□□□□□ -1.54
LIMA1-215ENST00000552823 HSPA1BP0DMV9 641 aaKnown RBP5.44□□□□□ -1.54
LIMA1-215ENST00000552823 ACPPP15309 386 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 HOXB8P17481 243 aaPredicted RBP5.44□□□□□ -1.54
LIMA1-215ENST00000552823 PTNP21246 168 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 HRH2P25021 359 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 ALDH4A1P30038 563 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 PPM1AP35813 382 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 SLC26A3P40879 764 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 CYP4F3Q08477 520 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 CNTN1Q12860 1018 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 TMEM115Q12893 351 aaPredicted RBP5.44□□□□□ -1.54
LIMA1-215ENST00000552823 NFE2L1Q14494 772 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 GSTA3Q16772 222 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 C5orf22Q49AR2 442 aa5.44□□□□□ -1.54
LIMA1-215ENST00000552823 SULT1C3Q6IMI6 304 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms