RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 DDA1Q9BW61 102 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 ASPSCR1Q9BZE9 553 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 RHOJQ9H4E5 214 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 XKR8Q9H6D3 395 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 FBXO8Q9NRD0 319 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 C1GALT1Q9NS00 363 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 ACTR10Q9NZ32 417 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 SLC39A10Q9ULF5 831 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 PCDHGA3Q9Y5H0 932 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 NFS1Q9Y697 457 aa16.78■□□□□ 0.28
CDK4-208ENST00000551706 FAM159BA6NKW6 160 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 AGRPO00253 132 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 RASGRF2O14827 1237 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 MAP3K7O43318 606 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 KIF1CO43896 1103 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 PSIP1O75475 530 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 ZBTB11O95625 1053 aaPredicted RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 CHRM5P08912 532 aaPredicted RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 NELFEP18615 380 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 CDH3P22223 829 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 MCM3P25205 808 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 CD82P27701 267 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 PRDX3P30048 256 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 PKLRP30613 574 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 PHBP35232 272 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 ETV5P41161 510 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 ARL4DP49703 201 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 SEPHS1P49903 392 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 KPNA2P52292 529 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 CDKN2DP55273 166 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 MC2RQ01718 297 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 VAC14Q08AM6 782 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 NAB1Q13506 487 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 KIR2DS3Q14952 304 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 COLEC12Q5KU26 742 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 DCAF12Q5T6F0 453 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 CPNE9Q8IYJ1 553 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 BMPERQ8N8U9 685 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 SNRNP27Q8WVK2 155 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 USP7Q93009 1102 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 SLC22A18Q96BI1 424 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 SLC41A2Q96JW4 573 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 TEFMQ96QE5 360 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 ZPBPQ9BS86 351 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 MENTQ9BUN1 341 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 OCIAD1Q9NX40 245 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 SLC39A1Q9NY26 324 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 LNPEPQ9UIQ6 1025 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 TSR3Q9UJK0 312 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 ACSL6Q9UKU0 697 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 PLAGL1Q9UM63 463 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 RUVBL2Q9Y230 463 aaKnown RBP16.77■□□□□ 0.28
CDK4-208ENST00000551706 PCDHB11Q9Y5F2 797 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 PSAT1Q9Y617 370 aa16.77■□□□□ 0.28
CDK4-208ENST00000551706 IGHV5-51A0A0C4DH38 117 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 ESPNB1AK53 854 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 ZBTB14O43829 449 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 TPBGLP0DKB5 382 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 FDXRP22570 491 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 MAP4P27816 1152 aaKnown RBP16.76■□□□□ 0.27
CDK4-208ENST00000551706 SLC5A2P31639 672 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 GP5P40197 560 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 HSD11B2P80365 405 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 TIAL1Q01085 375 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDK4-208ENST00000551706 GRB7Q14451 532 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 PAQR3Q6TCH7 311 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 SPESP1Q6UW49 350 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 CEACAM20Q6UY09 585 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 CTAGE3PQ8IX95 158 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 FBXO15Q8NCQ5 510 aaPredicted RBP16.76■□□□□ 0.27
CDK4-208ENST00000551706 OR2L8Q8NGY9 312 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 HMGCLL1Q8TB92 370 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 KCNE4Q8WWG9 221 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 ASB11Q8WXH4 323 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 VPS39Q96JC1 886 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 ELMO2Q96JJ3 720 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 PITPNM3Q9BZ71 974 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 TWSG1Q9GZX9 223 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 SMYD2Q9NRG4 433 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 SIDT1Q9NXL6 827 aaKnown RBP16.76■□□□□ 0.27
CDK4-208ENST00000551706 SPATA7Q9P0W8 599 aa16.76■□□□□ 0.27
CDK4-208ENST00000551706 USP9XQ93008 2570 aaPredicted RBP16.76■□□□□ 0.27
CDK4-208ENST00000551706 FAM95CA0A1B0GW59 222 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 CXorf49A8MYA2 514 aaPredicted RBP16.75■□□□□ 0.27
CDK4-208ENST00000551706 GFYI3L273 518 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 POLR1CO15160 346 aaPredicted RBP16.75■□□□□ 0.27
CDK4-208ENST00000551706 KLK10O43240 276 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 C1QAP02745 245 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 ECHS1P30084 290 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 HSD17B2P37059 387 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 BDKRB1P46663 353 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 IL2P60568 153 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 IL11RAQ14626 422 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 KBTBD12Q3ZCT8 623 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 TMTC4Q5T4D3 741 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 ANKS6Q68DC2 871 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 CYHR1Q6ZMK1 362 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 MYO1HQ8N1T3 1032 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 OR9A1PQ8NGU1 263 aa16.75■□□□□ 0.27
CDK4-208ENST00000551706 FBF1Q8TES7 1133 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms