RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 STX6O43752 255 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MOSPD3O75425 235 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 PSMD10O75832 226 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 AKAP3O75969 853 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 FTCDO95954 541 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 TUBBP07437 444 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 POLR2MP0CAP2 368 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 THEGLP0DJG4 465 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 HKR1P10072 659 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ST6GAL1P15907 406 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 IFNAR1P17181 557 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 CTPS1P17812 591 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 EDN2P20800 178 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 DRD4P21917 467 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 GPR12P47775 334 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 RAB28P51157 221 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ARSEP51690 589 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 CAPZA1P52907 286 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ATXN3P54252 364 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 CYP4F2P78329 520 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 HOXA4Q00056 320 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 PTK6Q13882 451 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ADIPOQQ15848 244 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 IGFBP7Q16270 282 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MAPK6Q16659 721 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 PCGF3Q3KNV8 242 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ZNF628Q5EBL2 1059 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 C6orf141Q5SZD1 244 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 KIAA1614Q5VZ46 1190 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 LRRC8EQ6NSJ5 796 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 IQCHQ86VS3 1027 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 CEP57Q86XR8 500 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MFN1Q8IWA4 741 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MFSD6LQ8IWD5 586 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 DHX40Q8IX18 779 aaKnown RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 SRRM1Q8IYB3 904 aaKnown RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 PAQR4Q8N4S7 273 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 C10orf53Q8N6V4 93 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 LINC01465Q8N7H1 131 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 EXD3Q8N9H8 876 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 IQUBQ8NA54 791 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 OR52N4Q8NGI2 321 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 SETD7Q8WTS6 366 aaKnown RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ZFPM2Q8WW38 1151 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 PIBF1Q8WXW3 757 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 RNF183Q96D59 192 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MSI2Q96DH6 328 aaKnown RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 CDHR1Q96JP9 859 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MBOAT7Q96N66 472 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 FCRL5Q96RD9 977 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MXRA8Q9BRK3 442 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MMADHCQ9H3L0 296 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 GDE1Q9NZC3 331 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 COQ3Q9NZJ6 369 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 CNOT8Q9UFF9 292 aaKnown RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ANAPC2Q9UJX6 822 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 FBXW11Q9UKB1 542 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ERVK-11Q9UQG0 969 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 BTBD3Q9Y2F9 522 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 RAP2CQ9Y3L5 183 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 MUC22E2RYF6 1773 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-208ENST00000551691 KNTC1P50748 2209 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 COL4A2P08572 1712 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 AKAP9Q99996 3911 aa3.75□□□□□ -1.81
LIMA1-208ENST00000551691 ICE1Q9Y2F5 2266 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 HELZP42694 1942 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 WDR81Q562E7 1941 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PDZD2O15018 2839 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TCRBV21S2A2A0A5A6 115 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 C17orf100A8MU93 164 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 FAM157AC9JC47 383 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 NPIPB11E5RHQ5 1161 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 DDX39AO00148 427 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 RNF113AO15541 343 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 RRP8O43159 456 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 C22orf31O95567 290 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 HIST1H2ABP04908 130 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 EGR2P11161 476 aaPredicted RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 DARSP14868 501 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TFEBP19484 476 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 ANXA7P20073 488 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 HIST1H2ADP20671 130 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PTAFRP25105 342 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TLX1P31314 330 aaPredicted RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PRCPP42785 496 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PTH2RP49190 550 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PNLIPRP2P54317 469 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 SLC12A2P55011 1212 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 GHRHRQ02643 423 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 ZBTB16Q05516 673 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PMPCAQ10713 525 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 RALGDSQ12967 914 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 DRP2Q13474 957 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PDCD11Q14690 1871 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 SNAPC1Q16533 368 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 ALG11Q2TAA5 492 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 ARMC4Q5T2S8 1044 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TSTD2Q5T7W7 516 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 LIN9Q5TKA1 542 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TWF2Q6IBS0 349 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms