RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ZNF385CQ66K41 422 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 KLHL35Q6PF15 583 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 UNC5AQ6ZN44 842 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 PPP1R32Q7Z5V6 425 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 LDB1Q86U70 411 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 VRK3Q8IV63 474 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 RBM12BQ8IXT5 1001 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 NXPE1Q8N323 547 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 CATSPER1Q8NEC5 780 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 OR8K1Q8NGG5 319 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 CFAP61Q8NHU2 1237 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ACTL9Q8TC94 416 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 LKAAEAR1Q8TD35 194 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 BRSK1Q8TDC3 778 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 THAP4Q8WY91 577 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 CPT1BQ92523 772 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 DCUN1D1Q96GG9 259 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 CNDP1Q96KN2 507 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 CCDC42Q96M95 316 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 FCRL4Q96PJ5 515 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 NLNQ9BYT8 704 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 RBSNQ9H1K0 784 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF552Q9H707 407 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 COG4Q9H9E3 785 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ABHD10Q9NUJ1 306 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 HAUS2Q9NVX0 235 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 SMARCAL1Q9NZC9 954 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 SLC2A6Q9UGQ3 507 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 RUVBL2Q9Y230 463 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 BTRCQ9Y297 605 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 R3HDM2Q9Y2K5 976 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF451Q9Y4E5 1061 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 PCDHGA9Q9Y5G4 932 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 DOCK10Q96BY6 2186 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ANKUB1A6NFN9 424 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 IQCF5A8MTL0 148 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 E7EQ34 232 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 H3BMH7 237 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 MFAP3LO75121 409 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 OR2B3O76000 313 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 METTL18O95568 372 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 STATHP02808 62 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 CELA2AP08217 269 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ATP1B2P14415 290 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ZFXP17010 805 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ITGA3P26006 1051 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 GRIA1P42261 906 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 OR1D4P47884 311 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 GABRA4P48169 554 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 EIF3EP60228 445 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 SNRPNP63162 240 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 Q0VFX4 171 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 PRKAA1Q13131 559 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 MPP3Q13368 585 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ITGA9Q13797 1035 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 BOP1Q14137 746 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 TAF1AQ15573 450 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 BCL7AQ4VC05 210 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 DCAF10Q5QP82 559 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 CCDC181Q5TID7 509 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 PAPD7Q5XG87 772 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 DARS2Q6PI48 645 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 RANBP10Q6VN20 620 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ARHGEF18Q6ZSZ5 1173 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 AMIGO1Q86WK6 493 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 KRT222Q8N1A0 295 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 GALNT16Q8N428 558 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ACVR1CQ8NER5 493 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 FLVCR1-AS1Q8TAF5 88 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 NUDT8Q8WV74 236 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 TFGQ92734 400 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 N4BP2L2Q92802 583 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 FAM136AQ96C01 138 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 C8orf44Q96CB5 159 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 SGSM3Q96HU1 749 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 OR2A14Q96R47 310 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 COPS8Q99627 209 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 SMAD5Q99717 465 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 CCM2Q9BSQ5 444 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 UNKQ9C0B0 810 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ILKAPQ9H0C8 392 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 GBA3Q9H227 469 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 TRABDQ9H4I3 376 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 SOX17Q9H6I2 414 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 C1GALT1Q9NS00 363 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 SMOXQ9NWM0 555 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 P4HTMQ9NXG6 502 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 PLA2G3Q9NZ20 509 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 CTSFQ9UBX1 484 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 NDOR1Q9UHB4 597 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 SERTAD3Q9UJW9 196 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 PACSIN2Q9UNF0 486 aaPredicted RBP6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 OSGIN2Q9Y236 505 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 MAU2Q9Y6X3 613 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 ZGRF1Q86YA3 2104 aa6.59□□□□□ -1.35
PRPF40B-214ENST00000551320 POLEQ07864 2286 aa6.59□□□□□ -1.36
PRPF40B-214ENST00000551320 CCDC168Q8NDH2 2452 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms