RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 C9J4A7 227 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 AP3B1O00203 1094 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 RASGRF2O14827 1237 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 MAST4O15021 2626 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 ZSCAN9O15535 394 aaPredicted RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 SORBS2O94875 1100 aaKnown RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 S1PR4O95977 384 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 RPN2P04844 631 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 MGAT1P26572 445 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 PGDP52209 483 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 CCZ1BP86790 482 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 CCZ1P86791 482 aaPredicted RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 ATP1A4Q13733 1029 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 CCSMST1Q4G0I0 132 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 FCRL6Q6DN72 434 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 MED25Q71SY5 747 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 LRRC6Q86X45 466 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 LRRC8AQ8IWT6 810 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 C2orf73Q8N5S3 287 aaPredicted RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 ZNF655Q8N720 491 aaPredicted RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 CFAP61Q8NHU2 1237 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 N4BP2L2Q92802 583 aaPredicted RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 BIRC8Q96P09 236 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 PANX3Q96QZ0 392 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 C17orf62Q9BQA9 187 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 NUDT9Q9BW91 350 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 SLC22A11Q9NSA0 550 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 EURLQ9NYK6 297 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 BFARQ9NZS9 450 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 GNPTGQ9UJJ9 305 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 SOX13Q9UN79 622 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 NFS1Q9Y697 457 aa12.92□□□□□ -0.34
GCN1-206ENST00000549815 USP9XQ93008 2570 aaPredicted RBP12.92□□□□□ -0.34
GCN1-206ENST00000549815 SHANK1Q9Y566 2161 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 CEP104O60308 925 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 C1orf105O95561 183 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 ONECUT2O95948 504 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 ITGAXP20702 1163 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 MAGEA6P43360 314 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 FOXL2P58012 376 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 DCDP81605 110 aaKnown RBP12.91□□□□□ -0.34
GCN1-206ENST00000549815 CDK16Q00536 496 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 GBX1Q14549 363 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 KCNJ11Q14654 390 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 SSPNQ14714 243 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 TMED2Q15363 201 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 TYSND1Q2T9J0 566 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 MLIPQ5VWP3 458 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 PTRHD1Q6GMV3 140 aaKnown RBP12.91□□□□□ -0.34
GCN1-206ENST00000549815 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 GSTA5Q7RTV2 222 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 MRGPREQ86SM8 312 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 RAB43Q86YS6 212 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 TRIM58Q8NG06 486 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 DENND1AQ8TEH3 1009 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 LPGAT1Q92604 370 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 SLC22A18Q96BI1 424 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 ZNF285Q96NJ3 590 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 SMAD5Q99717 465 aaKnown RBP12.91□□□□□ -0.34
GCN1-206ENST00000549815 SRPK3Q9UPE1 567 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 PADI2Q9Y2J8 665 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 ZNF451Q9Y4E5 1061 aa12.91□□□□□ -0.34
GCN1-206ENST00000549815 PCM1Q15154 2024 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 A0A1W2PPV9 198 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 ZNF185O15231 689 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 NDUFS3O75489 264 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 VAPBO95292 243 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 UMODP07911 640 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 OTX2P32243 289 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 CXCR5P32302 372 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 BDKRB1P46663 353 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 ADARP55265 1226 aaKnown RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 EIF3BP55884 814 aaKnown RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 NKAIN1Q4KMZ8 207 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 KIAA0930Q6ICG6 404 aaPredicted RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 TTC27Q6P3X3 843 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 MCATQ8IVS2 390 aaKnown RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 RBMXL3Q8N7X1 1067 aaKnown RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 Q8NA96 180 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 OR2Y1Q8NGV0 311 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 HMGCLL1Q8TB92 370 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 RAD51AP1Q96B01 352 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 HOMER3Q9NSC5 361 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 IFT80Q9P2H3 777 aaPredicted RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 ANKMY1Q9P2S6 941 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 SLC39A10Q9ULF5 831 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 TTC7AQ9ULT0 858 aaPredicted RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 RUVBL2Q9Y230 463 aaKnown RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 PTRH2Q9Y3E5 179 aaKnown RBP12.9□□□□□ -0.34
GCN1-206ENST00000549815 MAP4K5Q9Y4K4 846 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 KLK4Q9Y5K2 254 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 NUP210LQ5VU65 1888 aa12.9□□□□□ -0.34
GCN1-206ENST00000549815 KRT87PA6NCN2 255 aa12.89□□□□□ -0.35
GCN1-206ENST00000549815 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
GCN1-206ENST00000549815 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
GCN1-206ENST00000549815 KPNA5O15131 536 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms