RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SYCE2Q6PIF2 218 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 SERPINA13PQ6UXR4 307 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 SPRED1Q7Z699 444 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 C11orf96Q7Z7L8 435 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 BEND7Q8N7W2 519 aaPredicted RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 ESAMQ96AP7 390 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 AP2M1Q96CW1 435 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 NUS1Q96E22 293 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 PHF12Q96QT6 1004 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 YIPF3Q9GZM5 350 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 KCNH6Q9H252 994 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 PRSS16Q9NQE7 514 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 STOX2Q9P2F5 926 aaPredicted RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 MAGEL2Q9UJ55 1249 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 ZNF490Q9ULM2 529 aaPredicted RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 A0A096LPI6 279 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 TSPAN6O43657 245 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 ERN1O75460 977 aaKnown RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 C1orf105O95561 183 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 HOXC4P09017 264 aaPredicted RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 ITGB6P18564 788 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 NRIP1P48552 1158 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 GSK3BP49841 420 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 TXNL4AP83876 142 aaKnown RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 MESP2Q0VG99 397 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 ABRQ12979 859 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 CBX2Q14781 532 aaPredicted RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 RPS6KA2Q15349 733 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 PTCHD3Q3KNS1 767 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 CACHD1Q5VU97 1274 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 HMBOX1Q6NT76 420 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 UGT2A3Q6UWM9 527 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 EFCAB3Q8N7B9 438 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 NAT16Q8N8M0 369 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 CSGALNACT1Q8TDX6 532 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 SETD7Q8WTS6 366 aaKnown RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 UCMAQ8WVF2 138 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 CXorf40BQ96DE9 158 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 CGREF1Q99674 301 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 EGFL8Q99944 293 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 EFHD1Q9BUP0 239 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 PITHD1Q9GZP4 211 aaPredicted RBP9.71□□□□□ -0.85
RAB5B-206ENST00000549505 EPB41L1Q9H4G0 881 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 PIDD1Q9HB75 910 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 SERHLQ9NQF3 203 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 LMCD1Q9NZU5 365 aa9.71□□□□□ -0.85
RAB5B-206ENST00000549505 TRIM64A6NGJ6 449 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 C1QTNF3-AMACRE9PGA6 284 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 KCNJ13O60928 360 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 PDYNP01213 254 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 CTSCP53634 463 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 MRPS22P82650 360 aaKnown RBP9.71□□□□□ -0.86
RAB5B-206ENST00000549505 LRRC74AQ0VAA2 488 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 NFYCQ13952 458 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 GRIN2CQ14957 1233 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 ARHGAP19Q14CB8 494 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 NR6A1Q15406 480 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 FAM46CQ5VWP2 391 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 TRIM68Q6AZZ1 485 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 FAM109BQ6ICB4 259 aaPredicted RBP9.71□□□□□ -0.86
RAB5B-206ENST00000549505 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
RAB5B-206ENST00000549505 TNIP2Q8NFZ5 429 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 HM13Q8TCT9 377 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 STARD8Q92502 1023 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 ELMO1Q92556 727 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 SCARF2Q96GP6 870 aaPredicted RBP9.71□□□□□ -0.86
RAB5B-206ENST00000549505 SH3GL1Q99961 368 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 TEX101Q9BY14 249 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 ALG2Q9H553 416 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 PDP2Q9P2J9 529 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 DTNAQ9Y4J8 743 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 ANGPTL3Q9Y5C1 460 aa9.71□□□□□ -0.86
RAB5B-206ENST00000549505 ARPC2O15144 300 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 CATP04040 527 aaKnown RBP9.7□□□□□ -0.86
RAB5B-206ENST00000549505 BCKDHAP12694 445 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 C6P13671 934 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 GJA4P35212 333 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 FRG2Q64ET8 278 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 SUSD1Q6UWL2 747 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 MSRB3Q8IXL7 192 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 TRPV3Q8NET8 790 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 SLC13A3Q8WWT9 602 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 ZNF764Q96H86 408 aaPredicted RBP9.7□□□□□ -0.86
RAB5B-206ENST00000549505 FRG2BQ96QU4 278 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 SPATA9Q9BWV2 254 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 PAIP1Q9H074 479 aaKnown RBP9.7□□□□□ -0.86
RAB5B-206ENST00000549505 NT5DC2Q9H857 520 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 ZFP14Q9HCL3 533 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 FAM220BPB1ANY3 271 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 ANHXE9PGG2 379 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 BAG2O95816 211 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 ADH1BP00325 375 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 ABCB1P08183 1280 aaPredicted RBP9.7□□□□□ -0.86
RAB5B-206ENST00000549505 GGT1P19440 569 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 CD22P20273 847 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 HRH2P25021 359 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 IMPA1P29218 277 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 TRIM23P36406 574 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 HSD17B2P37059 387 aa9.7□□□□□ -0.86
RAB5B-206ENST00000549505 P2RY2P41231 377 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms