RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TMEM202A6NGA9 273 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PLK4O00444 970 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 POU2F1P14859 743 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PFKLP17858 780 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 MAGP20916 626 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ETV3P41162 512 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ZFP36L2P47974 494 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 CYP4F2P78329 520 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 SLC8B1Q6J4K2 584 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 GAREM2Q75VX8 874 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PDE10AQ9Y233 779 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PCDHB1Q9Y5F3 818 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 SPEGQ15772 3267 aa13.33□□□□□ -0.27
PRPF40B-209ENST00000548825 PRR23AA6NEV1 266 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 EVPLLA8MZ36 301 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 KPNA3O00505 521 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 CDH1P12830 882 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 TRIM60Q495X7 471 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 C8orf82Q6P1X6 216 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 GALNT18Q6P9A2 607 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 SYTL1Q8IYJ3 562 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 EID3Q8N140 333 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 SPPL2AQ8TCT8 520 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 GIPC3Q8TF64 312 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 NCSTNQ92542 709 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 UGT2B28Q9BY64 529 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 INTS6Q9UL03 887 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 COQ6Q9Y2Z9 468 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 PCDHGA11Q9Y5H2 935 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 TCRBV5S2A0A599 114 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 HOXA2O43364 376 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 MYF6P23409 242 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 PAX3P23760 479 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 SLC14A1Q13336 389 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 SMN1Q16637 294 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 CCSMST1Q4G0I0 132 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 INTS11Q5TA45 600 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 PDE12Q6L8Q7 609 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 CERS6Q6ZMG9 384 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 TMEM179BQ7Z7N9 219 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 GALNT7Q86SF2 657 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 HORMAD1Q86X24 394 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 LSRQ86X29 649 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 PROSER1Q86XN7 944 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 OR2AP1Q8NGE2 309 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 PEX13Q92968 403 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 BRD9Q9H8M2 597 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 TMEM39AQ9NV64 488 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 A0A0J9YVX5 310 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 H3BMQ9 156 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 CREG1O75629 220 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 PENKP01210 267 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 LHCGRP22888 699 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 HNF4AP41235 474 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 BDKRB1P46663 353 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 PSMD8P48556 350 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 NTHL1P78549 312 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 LRRC74AQ0VAA2 488 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 ZBED5Q49AG3 693 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 GPRC6AQ5T6X5 926 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 USP45Q70EL2 814 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 GLMNQ92990 594 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 COG8Q96MW5 612 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 P2RY13Q9BPV8 354 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 P2RY12Q9H244 342 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 NTN4Q9HB63 628 aa13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 CNOT11Q9UKZ1 510 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-209ENST00000548825 HLA-FP30511 346 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 MAP2K4P45985 399 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 TM4SF4P48230 202 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 PHC1P78364 1004 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 PON2Q15165 354 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 HKDC1Q2TB90 917 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 DEFB115Q30KQ5 88 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 Q6ZPB1 254 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 ERI1Q8IV48 349 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 ZDHHC21Q8IVQ6 265 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 OR5AK3PQ8NH89 298 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 TCEAL4Q96EI5 215 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 BRINP2Q9C0B6 783 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 REXO4Q9GZR2 422 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 RERGLQ9H628 205 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 MAGEE1Q9HCI5 957 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 SLC52A3Q9NQ40 469 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 SPASTQ9UBP0 616 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 FADS2O95864 444 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 BCL10O95999 233 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 ALDH1A1P00352 501 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 STATHP02808 62 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 NUDT7P0C024 238 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 OR56A5P0C7T3 313 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 HTR1EP28566 365 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 SH3BGRP55822 239 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 AP1S1P61966 158 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 NOGQ13253 232 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 CARTPTQ16568 116 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 CCNYL2Q5T2Q4 361 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 FAM43BQ6ZT52 329 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms