RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CHRAC1Q9NRG0 131 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 TREX1Q9NSU2 369 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 LUZP4Q9P127 313 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 G3BP2Q9UN86 482 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 KLHL20Q9Y2M5 609 aa16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 PTRH2Q9Y3E5 179 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-205ENST00000548650 ESPL1Q14674 2120 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 PRRC2CQ9Y520 2896 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 A6NL46 340 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 PRMT5O14744 637 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 KRT86O43790 486 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 VPS4BO75351 444 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 SLCO2B1O94956 709 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 RPN2P04844 631 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 APOA4P06727 396 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 ITGAXP20702 1163 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 CD9P21926 228 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 PPARGP37231 505 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 CRADDP78560 199 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 DCDP81605 110 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 RAPSNQ13702 412 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 TMED2Q15363 201 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 NKAIN1Q4KMZ8 207 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 PCID2Q5JVF3 399 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 MEI1Q5TIA1 1274 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 MLIPQ5VWP3 458 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 MRPL14Q6P1L8 145 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 HPS6Q86YV9 775 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 RBMXL3Q8N7X1 1067 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 IP6K3Q96PC2 410 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 PSMG3-AS1Q96PY0 264 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 P2RY12Q9H244 342 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 SLC22A11Q9NSA0 550 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 TXLNGQ9NUQ3 528 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 EURLQ9NYK6 297 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 IFT80Q9P2H3 777 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 GPN3Q9UHW5 284 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 VPS4AQ9UN37 437 aa16.73■□□□□ 0.27
CHMP1A-205ENST00000548650 S1PR4O95977 384 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 UMODP07911 640 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 ATXN8OSP0DMR3 200 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 GP1BBP13224 206 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 TTPAP49638 278 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 SESN2P58004 480 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 SSPNQ14714 243 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 RPS6KA1Q15418 735 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 CCNG2Q16589 344 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 DCAF10Q5QP82 559 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 VWA5B1Q5TIE3 1220 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 DRICH1Q6PGQ1 229 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 PPP1R32Q7Z5V6 425 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 MPP5Q8N3R9 675 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 OR2L8Q8NGY9 312 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 CFAP61Q8NHU2 1237 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 PNPLA2Q96AD5 504 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 NDC1Q9BTX1 674 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 MFRPQ9BY79 579 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 IRAK4Q9NWZ3 460 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 NDOR1Q9UHB4 597 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 UTP20O75691 2785 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 DOCK10Q96BY6 2186 aa16.72■□□□□ 0.27
CHMP1A-205ENST00000548650 BLACEA4D250 179 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 RASGRF2O14827 1237 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 CD3EAPO15446 510 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 RPS3P23396 243 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 ARNTP27540 789 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 INPP5JQ15735 1006 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 C2orf73Q8N5S3 287 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 SLC22A18Q96BI1 424 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 IL22Q9GZX6 179 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 P4HTMQ9NXG6 502 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 GNPTGQ9UJJ9 305 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 RUVBL2Q9Y230 463 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-205ENST00000548650 NBPF19A0A087WUL8 3843 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 A0A1B0GX78 115 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 KRT87PA6NCN2 255 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 PRICKLE3O43900 615 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 CD63P08962 238 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 NMBRP28336 390 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 BDKRB1P46663 353 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 BASP1P80723 227 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 CCSMST1Q4G0I0 132 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 CTSL3PQ5NE16 218 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 FCRL6Q6DN72 434 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 PTRHD1Q6GMV3 140 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 MCATQ8IVS2 390 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 CLEC1AQ8NC01 280 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 DLG3Q92796 817 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 FKBP10Q96AY3 582 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 FER1L6-AS2Q96M78 137 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 ZNF285Q96NJ3 590 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 PANX3Q96QZ0 392 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 RAB11FIP5Q9BXF6 653 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 ENAMQ9NRM1 1142 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 C5AR2Q9P296 337 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 ZKSCAN5Q9Y2L8 839 aa16.7■□□□□ 0.26
CHMP1A-205ENST00000548650 NFS1Q9Y697 457 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms