RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CES3Q6UWW8 571 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 PACS1Q6VY07 963 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF517Q6ZMY9 492 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF534Q76KX8 674 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 VRK3Q8IV63 474 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 SYTL1Q8IYJ3 562 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 KRT222Q8N1A0 295 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF655Q8N720 491 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-211ENST00000547950 C19orf47Q8N9M1 422 aaKnown RBP6.47□□□□□ -1.37
SCAF11-211ENST00000547950 PPHLN1Q8NEY8 458 aaKnown RBP6.47□□□□□ -1.37
SCAF11-211ENST00000547950 OR5K2Q8NHB8 316 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 GSDMBQ8TAX9 411 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 ASZ1Q8WWH4 475 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 LRFN5Q96NI6 719 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 RANBP9Q96S59 729 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 SLC25A23Q9BV35 468 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 CARD6Q9BX69 1037 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 TSSK1BQ9BXA7 367 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 AP1M1Q9BXS5 423 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 CATSPERZQ9NTU4 200 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 OR6C2Q9NZP2 312 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 MARCH4Q9P2E8 410 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-211ENST00000547950 GPN3Q9UHW5 284 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-211ENST00000547950 RIMKLBQ9ULI2 386 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 SCN8AQ9UQD0 1980 aa6.47□□□□□ -1.37
SCAF11-211ENST00000547950 A0A0J9YY10 115 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 C9J4A7 227 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 GOLGA8KD6RF30 607 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 GOLGA8TH3BQL2 631 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 ZSCAN9O15535 394 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 CEP104O60308 925 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 NDUFS3O75489 264 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 VAPBO95292 243 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 APOA4P06727 396 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 CAPN1P07384 714 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 HBQ1P09105 142 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 MSL3P1P0C860 447 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 CD9P21926 228 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 MGAT1P26572 445 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 NMBRP28336 390 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 GRIA3P42263 894 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 NPY2RP49146 381 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 FOXL2P58012 376 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 DCDP81605 110 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 ACVR1Q04771 509 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 RAPSNQ13702 412 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 UBAP2LQ14157 1087 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 SLC9A5Q14940 896 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 KIR2DS3Q14952 304 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 NCF4Q15080 339 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 SIX1Q15475 284 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 SF1Q15637 639 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 KYNUQ16719 465 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 DNAJC21Q5F1R6 531 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 AARS2Q5JTZ9 985 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 TTC23LQ6PF05 361 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 TAX1BP1Q86VP1 789 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 ATCAYQ86WG3 371 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 SLC22A15Q8IZD6 547 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 DNAJC22Q8N4W6 341 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 ZBTB2Q8N680 514 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 OTUD6BQ8N6M0 293 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 FLVCR1-AS1Q8TAF5 88 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 LKAAEAR1Q8TD35 194 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 SKA2Q8WVK7 121 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 UBE2Q2Q8WVN8 375 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 IL17FQ96PD4 163 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 DPH2Q9BQC3 489 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 TXLNGQ9NUQ3 528 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 BFARQ9NZS9 450 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 IFT80Q9P2H3 777 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 DHCR7Q9UBM7 475 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 NDOR1Q9UHB4 597 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 SLC39A10Q9ULF5 831 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 TTC7AQ9ULT0 858 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 G3BP2Q9UN86 482 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 PLCL2Q9UPR0 1127 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 CDYLQ9Y232 598 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 DRG1Q9Y295 367 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 PADI2Q9Y2J8 665 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 AP1M2Q9Y6Q5 423 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 ASH1LQ9NR48 2969 aaKnown RBP6.46□□□□□ -1.38
SCAF11-211ENST00000547950 BOD1L1Q8NFC6 3051 aa6.46□□□□□ -1.38
SCAF11-211ENST00000547950 TLN1Q9Y490 2541 aaKnown RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 SPTA1P02549 2419 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 CYSRT1A8MQ03 144 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 PEX12O00623 359 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 PRMT5O14744 637 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 VPS4BO75351 444 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 AVILO75366 819 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 GPC4O75487 556 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 KLF7O75840 302 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 SLCO2B1O94956 709 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 RPN2P04844 631 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 CCDC175P0C221 793 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 MAGP20916 626 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 AOAHP28039 575 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 PEBP1P30086 187 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms