RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 EIF3LQ9Y262 564 aaKnown RBP14.33□□□□□ -0.11
HOXC11-202ENST00000546378 DERAQ9Y315 318 aa14.33□□□□□ -0.11
HOXC11-202ENST00000546378 ZFP37Q9Y6Q3 630 aaPredicted RBP14.33□□□□□ -0.11
HOXC11-202ENST00000546378 MMP2P08253 660 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 NUDT7P0C024 238 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 S100A3P33764 101 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 FEN1P39748 380 aaKnown RBP14.33□□□□□ -0.12
HOXC11-202ENST00000546378 DCTP40126 519 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 MBTPS1Q14703 1052 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 AKAP14Q86UN6 197 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 LGALS12Q96DT0 336 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 MED8Q96G25 268 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 ZNF583Q96ND8 569 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 PANX1Q96RD7 426 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 IL4I1Q96RQ9 567 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 RNF38Q9H0F5 515 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 CD320Q9NPF0 282 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 ARL15Q9NXU5 204 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 A0A0U1RQF3 1178 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 TCRBV5S2A0A599 114 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 AIREO43918 545 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 KERAO60938 352 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 SSTR4P31391 388 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 S100A5P33763 92 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 PPP3CCP48454 512 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 SLC14A1Q13336 389 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 BTG3Q14201 252 aaPredicted RBP14.33□□□□□ -0.12
HOXC11-202ENST00000546378 CARD16Q5EG05 197 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 BHLHA9Q7RTU4 235 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 OR5AK3PQ8NH89 298 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 TRUB1Q8WWH5 349 aaKnown RBP14.33□□□□□ -0.12
HOXC11-202ENST00000546378 NELL1Q92832 810 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 OR51E2Q9H255 320 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 ELOVL6Q9H5J4 265 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 MAGEL2Q9UJ55 1249 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 WDR87Q6ZQQ6 2873 aa14.33□□□□□ -0.12
HOXC11-202ENST00000546378 CREG1O75629 220 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 FDXRP22570 491 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 HOXC8P31273 242 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ADARB1P78563 741 aaKnown RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CYP4F8P98187 520 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 SKIV2LQ15477 1246 aaKnown RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 DESI1Q6ICB0 168 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TPGS1Q6ZTW0 290 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 KIAA0408Q6ZU52 694 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 SPRED1Q7Z699 444 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 PHYKPLQ8IUZ5 450 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CLECL1Q8IZS7 167 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CHPT1Q8WUD6 406 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TOP1MTQ969P6 601 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CEP44Q9C0F1 390 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CLPBQ9H078 707 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TP63Q9H3D4 680 aaPredicted RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TBC1D14Q9P2M4 693 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 OPTCQ9UBM4 332 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CRLS1Q9UJA2 301 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 GNPTGQ9UJJ9 305 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 LRFN2Q9ULH4 789 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 DLGAP4Q9Y2H0 992 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 RAI2Q9Y5P3 530 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 SLC35F4A4IF30 521 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ZNF487B1APH4 448 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 RFXANKO14593 260 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ATXN1LP0C7T5 689 aaKnown RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CYP2C18P33260 490 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TTKP33981 857 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CDK5R2Q13319 367 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 USP41Q3LFD5 358 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ATAD3BQ5T9A4 648 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CNTN4Q8IWV2 1026 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ADHFE1Q8IWW8 467 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 RGL4Q8IZJ4 473 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ADGRG2Q8IZP9 1017 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 OTUB1Q96FW1 271 aaPredicted RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ZNF347Q96SE7 839 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 MBOAT4Q96T53 435 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 GIMAP4Q9NUV9 329 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 GPR83Q9NYM4 423 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 GIT1Q9Y2X7 761 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 FAM234BA2RU67 622 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 F5H5T6 163 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 B4GALT3O60512 393 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 SULT1C4O75897 302 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CKMT1AP12532 417 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 GADD45AP24522 165 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TIAL1Q01085 375 aaKnown RBP eCLIP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 SCAPQ12770 1279 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CACHD1Q5VU97 1274 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TMCO2Q7Z6W1 182 aaPredicted RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 RTN4RL1Q86UN2 441 aaPredicted RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 STX19Q8N4C7 294 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 VANGL1Q8TAA9 524 aaPredicted RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 PXYLP1Q8TE99 480 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 ATL1Q8WXF7 558 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 DACT3Q96B18 629 aaPredicted RBP14.32□□□□□ -0.12
HOXC11-202ENST00000546378 MCMBPQ9BTE3 642 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 TIGARQ9NQ88 270 aa14.32□□□□□ -0.12
HOXC11-202ENST00000546378 CEP290O15078 2479 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms