RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 MC2RQ01718 297 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 CAV1Q03135 178 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 KNOP1Q1ED39 458 aaKnown RBP6.53□□□□□ -1.36
CCDC60-205ENST00000546345 C5orf22Q49AR2 442 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 ALFQ53S48 1182 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 HSP90AA4PQ58FG1 418 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 MIIPQ5JXC2 388 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 OTUD1Q5VV17 481 aaPredicted RBP6.53□□□□□ -1.36
CCDC60-205ENST00000546345 DENND2CQ68D51 928 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 ENPP7Q6UWV6 458 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 RGS9BPQ6ZS82 235 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 ARHGEF18Q6ZSZ5 1173 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 TRMT10CQ7L0Y3 403 aaKnown RBP6.53□□□□□ -1.36
CCDC60-205ENST00000546345 SPATA21Q7Z572 469 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 SLFN11Q7Z7L1 901 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 KIF18BQ86Y91 864 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 NRROSQ86YC3 692 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 NRSN1Q8IZ57 195 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 ARHGAP24Q8N264 748 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 PPM1KQ8N3J5 372 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 KIAA0895Q8NCT3 520 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 PPFIBP2Q8ND30 876 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 FAM46DQ8NEK8 389 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 AGAP11Q8TF27 550 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 IFT81Q8WYA0 676 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 NCSTNQ92542 709 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 MAGOHBQ96A72 148 aaKnown RBP6.53□□□□□ -1.36
CCDC60-205ENST00000546345 WDR92Q96MX6 357 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 RPRD1AQ96P16 312 aaPredicted RBP6.53□□□□□ -1.36
CCDC60-205ENST00000546345 KRT12Q99456 494 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 BARD1Q99728 777 aaKnown RBP6.53□□□□□ -1.36
CCDC60-205ENST00000546345 IMPG2Q9BZV3 1241 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 LRMDAQ9H2I8 198 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 KCTD10Q9H3F6 313 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 ZDHHC6Q9H6R6 413 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 ANLNQ9NQW6 1124 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 SAR1AQ9NR31 198 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 SENP1Q9P0U3 644 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 ZNF212Q9UDV6 495 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 TRIM10Q9UDY6 481 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 VANGL2Q9ULK5 521 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 COMMD3-BMI1R4GMX3 469 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 HCFC1P51610 2035 aa6.53□□□□□ -1.36
CCDC60-205ENST00000546345 MN1Q10571 1320 aaPredicted RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 A0A0U1RQJ8 604 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 HEATR9A2RTY3 570 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 MIF4GDA9UHW6 222 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 DDX3XO00571 662 aaKnown RBP eCLIP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 PPM1DO15297 605 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 RAD51CO43502 376 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 KLRC4O43908 158 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 CEACAM4O75871 244 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 TM7SF2O76062 418 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 FBXO21O94952 628 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 TRUB2O95900 331 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 NR3C1P04150 777 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 RPSAP08865 295 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 IDO1P14902 403 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 BMP7P18075 431 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 GNAZP19086 355 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 NFKBIAP25963 317 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 ECHS1P30084 290 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 PTGER4P35408 488 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 GLRBP48167 497 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 KCNC1P48547 511 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 RPL34P49207 117 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 SLURP1P55000 103 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 NCALDP61601 193 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 FKBP3Q00688 224 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 MTA1Q13330 715 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 IL10RAQ13651 578 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 CRB2Q5IJ48 1285 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 RABGAP1LQ5R372 815 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 ANKRD40Q6AI12 368 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 KDELC2Q7Z4H8 507 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 TAF8Q7Z7C8 310 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 ZNF761Q86XN6 746 aaPredicted RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 GSPT2Q8IYD1 628 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 NAGSQ8N159 534 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 PELI3Q8N2H9 469 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 ESX1Q8N693 406 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 PLA2G15Q8NCC3 412 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 OR7D4Q8NG98 312 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 ATL2Q8NHH9 583 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 UBLCP1Q8WVY7 318 aaPredicted RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 MAIP1Q8WWC4 291 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 CTNNBL1Q8WYA6 563 aaPredicted RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 PNPLA2Q96AD5 504 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 RAB7BQ96AH8 199 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 THOC1Q96FV9 657 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 RBM41Q96IZ5 413 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 ZNF570Q96NI8 536 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 SMC6Q96SB8 1091 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 HEPHQ9BQS7 1158 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 WRAP53Q9BUR4 548 aaKnown RBP6.52□□□□□ -1.37
CCDC60-205ENST00000546345 APOOQ9BUR5 198 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 SLC25A23Q9BV35 468 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 NUDT9Q9BW91 350 aa6.52□□□□□ -1.37
CCDC60-205ENST00000546345 TM6SF2Q9BZW4 377 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms