RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 C1orf61Q13536 156 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 RFTN1Q14699 578 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 LARS2Q15031 903 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ADRM1Q16186 407 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FAM214AQ32MH5 1076 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 DGKKQ5KSL6 1271 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 RNASEH2BQ5TBB1 312 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 PTCRAQ6ISU1 281 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ZBTB49Q6ZSB9 765 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 GOLM1Q8NBJ4 401 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 TXNDC5Q8NBS9 432 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 GALNT6Q8NCL4 622 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 CMASQ8NFW8 434 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ITFG1Q8TB96 612 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF75CPQ92670 426 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FKBPLQ9UIM3 349 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 AP4B1Q9Y6B7 739 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ASNA1O43681 348 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SNAP91O60641 907 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 IPO13O94829 963 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 TRBC1P01850 177 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SLC6A2P23975 617 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 NUP62P37198 522 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 GABRB2P47870 512 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 IDH2P48735 452 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 ACTR3P61158 418 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 HNRNPKP61978 463 aaKnown RBP eCLIP8.42□□□□□ -1.061e-6■■■■□ 23.8
CLIP1-218ENST00000545889 NTHL1P78549 312 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SLC25A3Q00325 362 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CSTF1Q05048 431 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CMPK2Q5EBM0 449 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SPATA6LQ8N4H0 392 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 PHF10Q8WUB8 498 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 NELL1Q92832 810 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 RELTQ969Z4 430 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 TEKT5Q96M29 485 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 MARCH5Q9NX47 278 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 KCNK4Q9NYG8 393 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 XPR1Q9UBH6 696 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CORO2BQ9UQ03 480 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SCML2Q9UQR0 700 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 FAM72CH0Y354 149 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 TPPPO94811 219 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 LDLRP01130 860 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 NTSR1P30989 418 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 NKX2-5P52952 324 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 MYLK3Q32MK0 819 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SFT2D3Q587I9 215 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 FAM72AQ5TYM5 149 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 FAM72DQ6L9T8 149 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 FBXL22Q6P050 247 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 FAM72BQ86X60 149 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 OR4K17Q8NGC6 315 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 HIST1H2AAQ96QV6 131 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 DTLQ9NZJ0 730 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SCN1AP35498 2009 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 UPK3BL1B0FP48 263 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 UPK3BL2E5RIL1 263 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 TGM5O43548 720 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 POP7O75817 140 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF12P17014 697 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 FGFR3P22607 806 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 PPIBP23284 216 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 ATP5A1P25705 553 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 OXTRP30559 389 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A5P35504 534 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 VIPR2P41587 438 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CLCN7P51798 805 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 DEFA1P59665 94 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 DEFA3P59666 94 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CHIT1Q13231 466 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SLC8B1Q6J4K2 584 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 PAOXQ6QHF9 649 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 ATG14Q6ZNE5 492 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SDR16C5Q8N3Y7 309 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CAMKVQ8NCB2 501 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SPATA22Q8NHS9 363 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF671Q8TAW3 534 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CLSTN3Q9BQT9 956 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SERINC1Q9NRX5 453 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 A0A1W2PP55 124 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 C2orf78A6NCI8 922 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 PRR5-ARHGAP8B1AHC4 643 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 RFXAPO00287 272 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CCL22O00626 93 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 MYL12BO14950 172 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 AXIN1O15169 862 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SIN3BO75182 1162 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 RPL10P27635 214 aaKnown RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 HOXC8P31273 242 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 HNF1BP35680 557 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 SELENOVP59797 346 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CAMK1Q14012 370 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 HEPACAMQ14CZ8 416 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 GPR107Q5VW38 600 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 CYP4V2Q6ZWL3 525 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-218ENST00000545889 USP53Q70EK8 1073 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms