RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NSUN3Q9H649 340 aaKnown RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 IL1RAPQ9NPH3 570 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 SERHLQ9NQF3 203 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 EXD2Q9NVH0 621 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 VNN3Q9NY84 501 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 FBXO10Q9UK96 956 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ANGPTL3Q9Y5C1 460 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PLXNB3Q9ULL4 1909 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ILVBLA1L0T0 632 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 OR2A25A4D2G3 310 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 F8W810 466 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 MANBAO00462 879 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 CA12O43570 354 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 DPM1O60762 260 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 FAM20BO75063 409 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 SEC22BO75396 215 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 F11P03951 625 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 SEMG1P04279 462 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 GSTT2P0CG29 244 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 GSTT2BP0CG30 244 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PRPS2P11908 318 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 BCKDHAP12694 445 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ACPPP15309 386 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PTPN6P29350 595 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TGFBR2P37173 567 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 MAP2K4P45985 399 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TAF10Q12962 218 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 GBX1Q14549 363 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PHKG1Q16816 387 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 C18orf21Q32NC0 220 aaPredicted RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 SUSD1Q6UWL2 747 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TAS2R42Q7RTR8 314 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 SERPINA11Q86U17 422 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 SLC22A16Q86VW1 577 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PHACTR4Q8IZ21 702 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 KRTCAP2Q8N6L1 136 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ZNF540Q8NDQ6 660 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 KLHDC9Q8NEP7 349 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TESCQ96BS2 214 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 LGALS12Q96DT0 336 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 SPATA17Q96L03 361 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 CDK5RAP1Q96SZ6 601 aaKnown RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 ADAM2Q99965 735 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 HERC2P3Q9BVR0 1158 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PARVBQ9HBI1 364 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ELOVL2Q9NXB9 296 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 WWOXQ9NZC7 414 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 KLQ9UEF7 1012 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ZMYM5Q9UJ78 669 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 RPS6KA6Q9UK32 745 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ZNF490Q9ULM2 529 aaPredicted RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 ERVK-11Q9UQG0 969 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TSC22D4Q9Y3Q8 395 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 U3KQV3 271 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ALPK3Q96L96 1907 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 E9PQ18 207 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 H3BNC9 293 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 SYN3O14994 580 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 AREL1O15033 823 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ACSL4O60488 711 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 MITFO75030 526 aaPredicted RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 CLDN11O75508 207 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 FADS2O95864 444 aaKnown RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 GSNP06396 782 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ZDHHC11BP0C7U3 371 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ZNF7P17097 686 aaPredicted RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 DGKAP23743 735 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 PRPH2P23942 346 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 S100A3P33764 101 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 PPP3CCP48454 512 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ALDH7A1P49419 539 aaKnown RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 DAPP51397 102 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 NCS1P62166 190 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 RPS14P62263 151 aaKnown RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 PHC1P78364 1004 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 DSC1Q08554 894 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 PPP1R8Q12972 351 aaKnown RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 ABRQ12979 859 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 DNASE1L3Q13609 305 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 GTDC1Q4AE62 458 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 KIAA1614Q5VZ46 1190 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 TMEM236Q5W0B7 351 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ERICH5Q6P6B1 374 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 EFHBQ8N7U6 833 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 NAT16Q8N8M0 369 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 TTC29Q8NA56 475 aaPredicted RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 MCFD2Q8NI22 146 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ZHX1-C8orf76Q96EF9 292 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CTRCQ99895 268 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 SLX1AQ9BQ83 275 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ITPAQ9BY32 194 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CLPBQ9H078 707 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 RDH14Q9HBH5 336 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ZFP14Q9HCL3 533 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 IL17CQ9P0M4 197 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 AP1M2Q9Y6Q5 423 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 UTRNP46939 3433 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 OR6C75A6NL08 312 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms