RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 MMP28Q9H239 520 aa8.47□□□□□ -1.05
ATXN3-216ENST00000545170 RPF2Q9H7B2 306 aaKnown RBP8.47□□□□□ -1.05
ATXN3-216ENST00000545170 ATP13A1Q9HD20 1204 aa8.47□□□□□ -1.05
ATXN3-216ENST00000545170 WASH3PC4AMC7 463 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 UPK1BO75841 260 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 KAT7O95251 611 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 OR12D2P58182 307 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 SULT2A1Q06520 285 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 C14orf28Q4W4Y0 310 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 SERPINA13PQ6UXR4 307 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 ERMP1Q7Z2K6 904 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 ZNF550Q7Z398 422 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 TMEM139Q8IV31 216 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 CCDC74AQ96AQ1 378 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 DUSP16Q9BY84 665 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 TMEM27Q9HBJ8 222 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 MAGEB17A8MXT2 336 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 GKN3PP0CG01 181 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 GTF2F2P13984 249 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 CLCN4P51793 760 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 FXYD6P3P58550 94 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 ABRQ12979 859 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 C21orf62-AS1Q17RA5 79 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 CERCAMQ5T4B2 595 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 ARMC12Q5T9G4 340 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.46□□□□□ -1.05
ATXN3-216ENST00000545170 SPARTQ8N0X7 666 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 DNAAF1Q8NEP3 725 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 XAGE5Q8WWM1 108 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 FRZBQ92765 325 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 SNRNP25Q9BV90 132 aaKnown RBP8.46□□□□□ -1.05
ATXN3-216ENST00000545170 RTFDC1Q9BY42 306 aaPredicted RBP8.46□□□□□ -1.05
ATXN3-216ENST00000545170 NUFIP1Q9UHK0 495 aaKnown RBP8.46□□□□□ -1.05
ATXN3-216ENST00000545170 ZNF230Q9UIE0 474 aaPredicted RBP8.46□□□□□ -1.05
ATXN3-216ENST00000545170 SCP2D1Q9UJQ7 156 aa8.46□□□□□ -1.05
ATXN3-216ENST00000545170 TEX13DA0A0J9YY54 714 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 PROM1O43490 865 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 IFNA1P01562 189 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 CATP04040 527 aaKnown RBP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 CAPN3P20807 821 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 DLSTP36957 453 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 CDH8P55286 799 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 BCL2L1Q07817 233 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 PUM1Q14671 1186 aaKnown RBP eCLIP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 BCL2L15Q5TBC7 163 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 KANK2Q63ZY3 851 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 POMZP3Q6PJE2 187 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF367Q7RTV3 350 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 SLC5A11Q8WWX8 675 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 NCSTNQ92542 709 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 SGCDQ92629 289 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ALG3Q92685 438 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 LRRC58Q96CX6 371 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 EBPLQ9BY08 206 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 LRRC3Q9BY71 257 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 SLC39A8Q9C0K1 460 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ACTR6Q9GZN1 396 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 C14orf105Q9NVL8 296 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 LRFN1Q9P244 771 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 CYP8B1Q9UNU6 501 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 GPR89AB7ZAQ6 455 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 HSPA12AO43301 675 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 SUPT20HL2P0C7V6 817 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 GPR89BP0CG08 455 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 CXCL8P10145 99 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 CHATP28329 748 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 SREBF2Q12772 1141 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF460Q14592 562 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 MAD2L1BPQ15013 274 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 CLEC12AQ5QGZ9 265 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 FAM35AQ86V20 835 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 GJD3Q8N144 294 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 OR4L1Q8NH43 312 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ZDHHC1Q8WTX9 485 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF317Q96PQ6 595 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ALPK1Q96QP1 1244 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 OR10A4Q9H209 315 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ADAMTS6Q9UKP5 1117 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 MGAT4BQ9UQ53 548 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 A6NHS1 94 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 J3QLW9 94 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF19P17023 458 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 IMPDH1P20839 514 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 LARS2Q15031 903 aaKnown RBP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 FBXO47Q5MNV8 452 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 LYPLAL1Q5VWZ2 237 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 PGM2L1Q6PCE3 622 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 UBE2R2Q712K3 238 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-216ENST00000545170 SAMD12Q8N8I0 201 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 SMURF2Q9HAU4 748 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 IFT52Q9Y366 437 aa8.46□□□□□ -1.06
ATXN3-216ENST00000545170 INPPL1O15357 1258 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 NPHS1O60500 1241 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CREBL2O60519 120 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PSMD10O75832 226 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 MBP02144 154 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SRPRAP08240 638 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms