RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 NFATC3Q12968 1075 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 KCNAB2Q13303 367 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 SYDE1Q6ZW31 735 aaPredicted RBP16.32■□□□□ 0.2
HOXD8-204ENST00000544999 CREG2Q8IUH2 290 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 GPR135Q8IZ08 494 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 RAB42Q8N4Z0 105 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 ZBTB2Q8N680 514 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 APOBEC4Q8WW27 367 aaKnown RBP16.32■□□□□ 0.2
HOXD8-204ENST00000544999 CAPZA3Q96KX2 299 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 RUFY1Q96T51 708 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 SLC7A5P2Q9GIP4 190 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 SLC25A18Q9H1K4 315 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 CHST8Q9H2A9 424 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 C20orf96Q9NUD7 363 aaPredicted RBP16.32■□□□□ 0.2
HOXD8-204ENST00000544999 PCMTD2Q9NV79 361 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 CIDEBQ9UHD4 219 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 FARSAQ9Y285 508 aaKnown RBP16.32■□□□□ 0.2
HOXD8-204ENST00000544999 SAR1BQ9Y6B6 198 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 FAM169AQ9Y6X4 670 aa16.32■□□□□ 0.2
HOXD8-204ENST00000544999 ATRXP46100 2492 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 CDC14CA4D256 554 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 H3BMH7 237 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 ZNF749O43361 778 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 FKBP9O95302 570 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 MATN4O95460 622 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 FURINP09958 794 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 RAB40ALP0C0E4 278 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 PLA2G2AP14555 144 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 PGAM1P18669 254 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 SLC1A2P43004 574 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 CTBP1Q13363 440 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 DEFB110Q30KQ9 67 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 CNSTQ6PJW8 725 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 SYVN1Q86TM6 617 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 DENND6AQ8IWF6 608 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 DNAJC22Q8N4W6 341 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 C2orf73Q8N5S3 287 aaPredicted RBP16.31■□□□□ 0.2
HOXD8-204ENST00000544999 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
HOXD8-204ENST00000544999 FAM136AQ96C01 138 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 FAM167BQ9BTA0 163 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 CCDC68Q9H2F9 335 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 FBXO6Q9NRD1 293 aaPredicted RBP16.31■□□□□ 0.2
HOXD8-204ENST00000544999 INTS7Q9NVH2 962 aaKnown RBP16.31■□□□□ 0.2
HOXD8-204ENST00000544999 SPATA7Q9P0W8 599 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 KLHL42Q9P2K6 505 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 RUVBL2Q9Y230 463 aaKnown RBP16.31■□□□□ 0.2
HOXD8-204ENST00000544999 AP1M2Q9Y6Q5 423 aa16.31■□□□□ 0.2
HOXD8-204ENST00000544999 PRICKLE3O43900 615 aaPredicted RBP16.3■□□□□ 0.2
HOXD8-204ENST00000544999 OR2B3O76000 313 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 MAGP20916 626 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 IVDP26440 423 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 CLCN7P51798 805 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 RPS18P62269 152 aaKnown RBP16.3■□□□□ 0.2
HOXD8-204ENST00000544999 DHX9Q08211 1270 aaKnown RBP16.3■□□□□ 0.2
HOXD8-204ENST00000544999 UGT8Q16880 541 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 TTLL9Q3SXZ7 439 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 CCSMST1Q4G0I0 132 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 ACSBG2Q5FVE4 666 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 LCN10Q6JVE6 187 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 NEK10Q6ZWH5 1172 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 TAX1BP1Q86VP1 789 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 KCNMB4Q86W47 210 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 FAM20CQ8IXL6 584 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 KLHL7Q8IXQ5 586 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 SYTL1Q8IYJ3 562 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 LMNTD1Q8N9Z9 388 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 HMGCLL1Q8TB92 370 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 KCNJ9Q92806 393 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 DPH2Q9BQC3 489 aaPredicted RBP16.3■□□□□ 0.2
HOXD8-204ENST00000544999 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.3■□□□□ 0.2
HOXD8-204ENST00000544999 GALPQ9UBC7 116 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 FBXO5Q9UKT4 447 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 PLCL2Q9UPR0 1127 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 HEMK1Q9Y5R4 338 aaPredicted RBP16.3■□□□□ 0.2
HOXD8-204ENST00000544999 KCNMB2Q9Y691 235 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 COMMD10Q9Y6G5 202 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 ATMQ13315 3056 aa16.3■□□□□ 0.2
HOXD8-204ENST00000544999 CCDC188H7C350 402 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 SMAPO00193 183 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 HCRTR1O43613 425 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 PSIP1O75475 530 aaKnown RBP16.29■□□□□ 0.2
HOXD8-204ENST00000544999 TTC4O95801 387 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 PAFAH1B1P43034 410 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 CRYMQ14894 314 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 MORF4L2Q15014 288 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 KLHL38Q2WGJ6 581 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 ZNF385CQ66K41 422 aaPredicted RBP16.29■□□□□ 0.2
HOXD8-204ENST00000544999 TLDC1Q6P9B6 456 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 FAM198BQ6UWH4 519 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 GABPB2Q8TAK5 448 aaPredicted RBP16.29■□□□□ 0.2
HOXD8-204ENST00000544999 DENND1AQ8TEH3 1009 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 THAP4Q8WY91 577 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 EBNA1BP2Q99848 306 aaKnown RBP16.29■□□□□ 0.2
HOXD8-204ENST00000544999 NAT9Q9BTE0 207 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 NLNQ9BYT8 704 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 SPRTNQ9H040 489 aaPredicted RBP16.29■□□□□ 0.2
HOXD8-204ENST00000544999 IARS2Q9NSE4 1012 aaKnown RBP16.29■□□□□ 0.2
HOXD8-204ENST00000544999 RNF14Q9UBS8 474 aa16.29■□□□□ 0.2
HOXD8-204ENST00000544999 TSR3Q9UJK0 312 aaKnown RBP16.29■□□□□ 0.2
HOXD8-204ENST00000544999 SRPK3Q9UPE1 567 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms