RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ITGB6P18564 788 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 OGNP20774 298 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 RPS3P23396 243 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CASQ1P31415 396 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 LEPRP48357 1165 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 SEPHS1P49903 392 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 EIF3BP55884 814 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CXADRP78310 365 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 DR1Q01658 176 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 HSPA14Q0VDF9 509 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 PTK6Q13882 451 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 DHX34Q14147 1143 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 IL11RAQ14626 422 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 KCTD19Q17RG1 926 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 ANKRD20A4Q4UJ75 823 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 ZNF658BQ4V348 819 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 MANEAQ5SRI9 462 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 RNASEH2BQ5TBB1 312 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 ANKS6Q68DC2 871 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CES3Q6UWW8 571 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CCDC81Q6ZN84 652 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 FAM92BQ6ZTR7 304 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 GPR155Q7Z3F1 870 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 LDB1Q86U70 411 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 HOOK3Q86VS8 718 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 ZFAND4Q86XD8 727 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 KMT5CQ86Y97 462 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CREG2Q8IUH2 290 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 KLHL7Q8IXQ5 586 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 LMNTD2Q8IXW0 634 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 TBC1D21Q8IYX1 336 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CARFQ8N187 725 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 BMPERQ8N8U9 685 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 SIDT2Q8NBJ9 832 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 GALNT11Q8NCW6 608 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 OR4E2Q8NGC2 313 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CALML6Q8TD86 181 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 LCN9Q8WX39 176 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 JPH3Q8WXH2 748 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 KLHL6Q8WZ60 621 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 ZNF669Q96BR6 464 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 FCRL3Q96P31 734 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 CCNL2Q96S94 520 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 TRIT1Q9H3H1 467 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 TFB2MQ9H5Q4 396 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 PDE7BQ9NP56 450 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 KCND1Q9NSA2 647 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 MARCH4Q9P2E8 410 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 B3GALT1Q9Y5Z6 326 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 MRFAP1Q9Y605 127 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 MAD1L1Q9Y6D9 718 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 RPS6KL1Q9Y6S9 549 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 FASNP49327 2511 aaKnown RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 SDK2Q58EX2 2172 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ASPMQ8IZT6 3477 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 TEX51A0A1B0GUA7 166 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 FAM221AA4D161 298 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 GSAPA4D1B5 854 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 TLCD2A6NGC4 264 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 GOLGA8KD6RF30 607 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 GOLGA8TH3BQL2 631 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 KIF1CO43896 1103 aaKnown RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 DEAF1O75398 565 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 GPC4O75487 556 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ZBTB11O95625 1053 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 TTC4O95801 387 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ESR1P03372 595 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 NELFEP18615 380 aaKnown RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 POLR2CP19387 275 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 CDH3P22223 829 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 AOAHP28039 575 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ACADLP28330 430 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 FMO4P31512 558 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 CCR7P32248 378 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 SHMT2P34897 504 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 MAGEA3P43357 314 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ARCN1P48444 511 aaKnown RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 CSE1LP55060 971 aaKnown RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ADARP55265 1226 aaKnown RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 HSD11B2P80365 405 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ACY1Q03154 408 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 PRKG2Q13237 762 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 TYSND1Q2T9J0 566 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 DNAJC21Q5F1R6 531 aaKnown RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 EXOSC6Q5RKV6 272 aaKnown RBP7.15□□□□□ -1.26
CPSF7-224ENST00000544990 PLEKHS1Q5SXH7 462 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 TMTC4Q5T4D3 741 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 ARHGAP40Q5TG30 622 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 IZUMO3Q5VZ72 239 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 FBXW10Q5XX13 1052 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 NEPROQ6NW34 567 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 TTC23LQ6PF05 361 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 NAPRTQ6XQN6 538 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 OTOAQ7RTW8 1153 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 TMEM135Q86UB9 458 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 AMIGO1Q86WK6 493 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 DTX1Q86Y01 620 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 RASGRP3Q8IV61 690 aa7.15□□□□□ -1.26
CPSF7-224ENST00000544990 SLC22A15Q8IZD6 547 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms