RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 MBNL1Q9NR56 388 aaKnown RBP12.4□□□□□ -0.42
PAAF1-214ENST00000544552 PHPT1Q9NRX4 125 aaPredicted RBP12.4□□□□□ -0.42
PAAF1-214ENST00000544552 GPRC5BQ9NZH0 403 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 MAP10Q9P2G4 905 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 THEGQ9P2T0 379 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 FAM8A1Q9UBU6 413 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 LIMD1Q9UGP4 676 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 BCAP29Q9UHQ4 241 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 CROTQ9UKG9 612 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 TMEM98Q9Y2Y6 226 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 L3MBTL1Q9Y468 752 aa12.4□□□□□ -0.42
PAAF1-214ENST00000544552 ANKRD28O15084 1053 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 KMOO15229 486 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 CFLARO15519 480 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 PRAMEF4O60810 478 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 RSL1D1O76021 490 aaKnown RBP12.39□□□□□ -0.43
PAAF1-214ENST00000544552 NPPAP01160 153 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 ACPPP15309 386 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 CAPN3P20807 821 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 COL9A1P20849 921 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 ME2P23368 584 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 HNF4AP41235 474 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 DPP6P42658 865 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 ADPRHP54922 357 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 KCNK10P57789 538 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 CHIT1Q13231 466 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 PRKG2Q13237 762 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 NAE1Q13564 534 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 CEACAM7Q14002 265 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 IRF4Q15306 451 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 CPSF6Q16630 551 aaKnown RBP eCLIP12.39□□□□□ -0.43
PAAF1-214ENST00000544552 SPATS1Q496A3 300 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 VPS26BQ4G0F5 336 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 IL23RQ5VWK5 629 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 PRAMEF9Q5VWM5 478 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 METRNLQ641Q3 311 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 CRTC3Q6UUV7 619 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 HORMAD1Q86X24 394 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 ZFAND4Q86XD8 727 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 CACUL1Q86Y37 369 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 RGL4Q8IZJ4 473 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 MINDY1Q8N5J2 469 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 OR9A1PQ8NGU1 263 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 GANCQ8TET4 914 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 SPDL1Q96EA4 605 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 GPATCH1Q9BRR8 931 aaKnown RBP12.39□□□□□ -0.43
PAAF1-214ENST00000544552 LGR4Q9BXB1 951 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 ZDHHC5Q9C0B5 715 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 EBF2Q9HAK2 575 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 SPAG4Q9NPE6 437 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 FARSBQ9NSD9 589 aaKnown RBP12.39□□□□□ -0.43
PAAF1-214ENST00000544552 GID8Q9NWU2 228 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 C1orf109Q9NX04 203 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 ZNHIT2Q9UHR6 403 aa12.39□□□□□ -0.43
PAAF1-214ENST00000544552 EIF3LQ9Y262 564 aaKnown RBP12.39□□□□□ -0.43
PAAF1-214ENST00000544552 A0A1W2PQU0 124 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 NR5A2O00482 541 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 TRIM38O00635 465 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 ANGPT2O15123 496 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 KCNJ13O60928 360 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 KRT36O76013 467 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 G6PDP11413 515 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 MYCLP1P12525 358 aaPredicted RBP12.38□□□□□ -0.43
PAAF1-214ENST00000544552 SLC2A4P14672 509 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 JAK1P23458 1154 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 ITPKAP23677 461 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 BDKRB1P46663 353 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 POLR2JP52435 117 aaKnown RBP12.38□□□□□ -0.43
PAAF1-214ENST00000544552 THOP1P52888 689 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 UFM1P61960 85 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 AP2B1P63010 937 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 IRF8Q02556 426 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 TFF2Q03403 129 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 FOXM1Q08050 763 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 DMPKQ09013 629 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 NFE2L1Q14494 772 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 NUMA1Q14980 2115 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 KIAA0040Q15053 153 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 RCN1Q15293 331 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 IMPG1Q17R60 797 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 CCSMST1Q4G0I0 132 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 EOGTQ5NDL2 527 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 FRG2Q64ET8 278 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 PRMT9Q6P2P2 845 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 CYP20A1Q6UW02 462 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 RETREG3Q86VR2 466 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 FAM9CQ8IZT9 166 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 ZNF480Q8WV37 535 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 SELENOMQ8WWX9 145 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 SIPA1Q96FS4 1042 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 METTL2AQ96IZ6 378 aaKnown RBP12.38□□□□□ -0.43
PAAF1-214ENST00000544552 TEX37Q96LM6 180 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 FRG2BQ96QU4 278 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 OR4K3Q96R72 315 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 ELOVL6Q9H5J4 265 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 PRDM6Q9NQX0 595 aa12.38□□□□□ -0.43
PAAF1-214ENST00000544552 TMEM181Q9P2C4 612 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms