RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KLHL31Q9H511 634 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 COMMD9Q9P000 198 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 TAC3Q9UHF0 121 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 TMEM59LQ9UK28 342 aa12.54□□□□□ -0.4
CHD4-211ENST00000544484 POP7O75817 140 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 PSMA1P25786 263 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 NRIP1P48552 1158 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 TEAD4Q15561 434 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FRRS1Q6ZNA5 592 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 PSAT1Q9Y617 370 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 STYXL1Q9Y6J8 313 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FAM72CH0Y354 149 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 BEST1O76090 585 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 IL18R1Q13478 541 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FAM72AQ5TYM5 149 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 PRAMEF13Q5VWM6 474 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FAM72DQ6L9T8 149 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FAM72BQ86X60 149 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 LEMD2Q8NC56 503 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 OR9I1Q8NGQ6 314 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 NODALQ96S42 347 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 SEZ6LQ9BYH1 1024 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 SLC32A1Q9H598 525 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 ZNF282Q9UDV7 671 aaPredicted RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 A8MUA0 341 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 WWP2O00308 870 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 KLK1P06870 262 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FUT4P22083 530 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 AHCYP23526 432 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 SUZ12Q15022 739 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 AKIRIN2Q53H80 203 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 CLIP4Q8N3C7 705 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 HM13Q8TCT9 377 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 TMEM98Q9Y2Y6 226 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FAM25EA8MYX2 175 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 LOC730098B7Z3J9 87 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 GBAP04062 536 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 CCR8P51685 355 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 TARDBPQ13148 414 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHD4-211ENST00000544484 IL18Q14116 193 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 ADGRE1Q14246 886 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 BRAT1Q6PJG6 821 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 IQCHQ86VS3 1027 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 RANBP3LQ86VV4 465 aaPredicted RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 ZSCAN5AQ9BUG6 496 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 XYLT2Q9H1B5 865 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 C8orf4Q9NR00 106 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 DPPA5A6NC42 116 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.42e-10■■■■■ 32.8
CHD4-211ENST00000544484 IL12BP29460 328 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 ZZZ3Q8IYH5 903 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 CELF5Q8N6W0 485 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 TSTD1Q8NFU3 115 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 TSEN15Q8WW01 171 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 RASSF5Q8WWW0 418 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 KCNA7Q96RP8 456 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 LRRC3Q9BY71 257 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 DIABLOQ9NR28 239 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 KCNK6Q9Y257 313 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 BAZ2AQ9UIF9 1905 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 EI24O14681 340 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 MAGEB3O15480 346 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 ERI3O43414 337 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 GJB5O95377 273 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 XRCC1P18887 633 aaPredicted RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 AZGP1P25311 298 aaKnown RBP12.53□□□□□ -0.4
CHD4-211ENST00000544484 GRM2Q14416 872 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 OR4F6Q8NGB9 312 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 CCM2Q9BSQ5 444 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 ZDHHC4Q9NPG8 344 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 GIMAP2Q9UG22 337 aa12.53□□□□□ -0.4
CHD4-211ENST00000544484 PRKAR1AP10644 381 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 VIPR1P32241 457 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 MNDAP41218 407 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 LIN52Q52LA3 116 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 FRG2Q64ET8 278 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 FAM46DQ8NEK8 389 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 LMO3Q8TAP4 145 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 BPIFB1Q8TDL5 484 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 C11orf24Q96F05 449 aaPredicted RBP12.52□□□□□ -0.4
CHD4-211ENST00000544484 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.4
CHD4-211ENST00000544484 FRG2BQ96QU4 278 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 TLR9Q9NR96 1032 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 PHF11Q9UIL8 331 aa12.52□□□□□ -0.4
CHD4-211ENST00000544484 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.4
CHD4-211ENST00000544484 IRGMA1A4Y4 181 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 STX16O14662 325 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 RGS20O76081 388 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 FAM163BP0C2L3 166 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 RAP2AP10114 183 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 ROR2Q01974 943 aaKnown RBP12.52□□□□□ -0.41
CHD4-211ENST00000544484 HYAL2Q12891 473 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 CARTPTQ16568 116 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 OGFOD2Q6N063 350 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms