RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 RIPOR3Q96MK2 946 aa12.56□□□□□ -0.4
PDZD4-209ENST00000544474 PHOX2BQ99453 314 aa12.56□□□□□ -0.4
PDZD4-209ENST00000544474 MEAF6Q9HAF1 191 aa12.56□□□□□ -0.4
PDZD4-209ENST00000544474 OAS3Q9Y6K5 1087 aaKnown RBP12.56□□□□□ -0.4
PDZD4-209ENST00000544474 TYW5A2RUC4 315 aaKnown RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 NUPL2O15504 423 aaKnown RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SGTAO43765 313 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SNX4O95219 450 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 IL7P13232 177 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 TNFRSF1BP20333 461 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 PRMT9Q6P2P2 845 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 NRARPQ7Z6K4 114 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 CYP4Z1Q86W10 505 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 TIGD4Q8IY51 512 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 STX19Q8N4C7 294 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SCAMP5Q8TAC9 235 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 DYNC2LI1Q8TCX1 351 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 DNAJB3Q8WWF6 145 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 LPPQ93052 612 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 PYCR2Q96C36 320 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 ROPN1LQ96C74 230 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 MTERF3Q96E29 417 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 LEF1Q9UJU2 399 aaPredicted RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 PCDHB14Q9Y5E9 798 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 COL11A1P12107 1806 aaPredicted RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 ZFC3H1O60293 1989 aaKnown RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 CASTOR2A6NHX0 329 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 DNAJB5O75953 348 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SLITRK5O94991 958 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 PDGFAP04085 211 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 HRH2P25021 359 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 GEMP55040 296 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 DNAJB13P59910 316 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SV2CQ496J9 727 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 IRAK1BP1Q5VVH5 260 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 APOBEC3FQ8IUX4 373 aaKnown RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 LURAP1LQ8IV03 231 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 VANGL1Q8TAA9 524 aaPredicted RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 PHF21AQ96BD5 680 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 COLEC11Q9BWP8 271 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SP110Q9HB58 689 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 RANGRFQ9HD47 186 aaPredicted RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 TAS2R9Q9NYW1 312 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 UXTQ9UBK9 157 aaPredicted RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SAMHD1Q9Y3Z3 626 aaKnown RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 MYBPHLA2RUH7 354 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 NDUFS3O75489 264 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 MSH3P20585 1137 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 ZNF280AP59817 542 aaPredicted RBP12.55□□□□□ -0.4
PDZD4-209ENST00000544474 MVKQ03426 396 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 MAPKAPK3Q16644 382 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 NOTUMQ6P988 496 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 NLGN4XQ8N0W4 816 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 TTLQ8NG68 377 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 BCL7BQ9BQE9 202 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 SERHL2Q9H4I8 314 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 NTN4Q9HB63 628 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 VAPAQ9P0L0 249 aa12.55□□□□□ -0.4
PDZD4-209ENST00000544474 H3BM21 787 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 H3BRB1 525 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 RGS10O43665 173 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 SEC22BO75396 215 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 APOL3O95236 402 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ETV1P50549 477 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ZXDBP98169 803 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ZNF404Q494X3 552 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ZRANB3Q5FWF4 1079 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 SHEQ5VZ18 495 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 VTCN1Q7Z7D3 282 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ISCA2Q86U28 154 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 RASAL3Q86YV0 1011 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ULK4Q96C45 1275 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ASB2Q96Q27 587 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 SLC9A7Q96T83 725 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 LIN7BQ9HAP6 207 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 GLTPQ9NZD2 209 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 FBXW11Q9UKB1 542 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 SHROOM3Q8TF72 1996 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 PHIPQ8WWQ0 1821 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 A0A1W2PP18 115 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 SYNDIG1LA6NDD5 238 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ZNF780AO75290 641 aaPredicted RBP12.54□□□□□ -0.4
PDZD4-209ENST00000544474 MLYCDO95822 493 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 OPN1SWP03999 348 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ALPLP05186 524 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 CDKN1CP49918 316 aaPredicted RBP12.54□□□□□ -0.4
PDZD4-209ENST00000544474 BNC1Q01954 994 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ZNF267Q14586 743 aaPredicted RBP12.54□□□□□ -0.4
PDZD4-209ENST00000544474 ZMYND11Q15326 602 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 NKG7Q16617 165 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 CPSF6Q16630 551 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDZD4-209ENST00000544474 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
PDZD4-209ENST00000544474 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 CYHR1Q6ZMK1 362 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 RAB43Q86YS6 212 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms