RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 NDRG2Q9UN36 371 aaKnown RBP9.08□□□□□ -0.96
GNE-206ENST00000543356 BRWD1Q9NSI6 2320 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 LRRC72A6NJI9 287 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 MEI4A8MW99 385 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 UGDHO60701 494 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 KCNJ13O60928 360 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 CD72P21854 359 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 IMPA1P29218 277 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 HTR6P50406 440 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 DGKEP52429 567 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 MXRA7P84157 204 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 PCDH1Q08174 1060 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 CYLC2Q14093 348 aaPredicted RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 FASTKQ14296 549 aaKnown RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 GRB7Q14451 532 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 CCSMST1Q4G0I0 132 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 TCHHL1Q5QJ38 904 aaPredicted RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 METRNLQ641Q3 311 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 AGTRAPQ6RW13 159 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 SYT13Q7L8C5 426 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 FAM124AQ86V42 546 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 DCBLD1Q8N8Z6 715 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 L3MBTL4Q8NA19 623 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 OR2T11Q8NH01 316 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 OR56A3Q8NH54 315 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 HMGCLL1Q8TB92 370 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 USP7Q93009 1102 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 MCUR1Q96AQ8 359 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 SCARF2Q96GP6 870 aaPredicted RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 APOOQ9BUR5 198 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 ZDHHC5Q9C0B5 715 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 SPATA7Q9P0W8 599 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 SLC23A2Q9UGH3 650 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 KCNE1BA0A087WTH5 132 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 PSMD12O00232 456 aaPredicted RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 CACNB4O00305 520 aaPredicted RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 SLC28A1O00337 649 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 IDO1P14902 403 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 IL9P15248 144 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 MAT2AP31153 395 aaKnown RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 ERVK-8P63133 956 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 GRIK2Q13002 908 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 SMU1Q2TAY7 513 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 IL27RAQ6UWB1 636 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 Q6ZS52 159 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 Q7L0L9 218 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 THOC6Q86W42 341 aaKnown RBP9.07□□□□□ -0.96
GNE-206ENST00000543356 BTBD1Q9H0C5 482 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 ACTR8Q9H981 624 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 CD93Q9NPY3 652 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 AIG1Q9NVV5 245 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 GPRC5BQ9NZH0 403 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 ACSL5Q9ULC5 683 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 SLC22A14Q9Y267 594 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 RNF11Q9Y3C5 154 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 PRKAB1Q9Y478 270 aa9.07□□□□□ -0.96
GNE-206ENST00000543356 LOC100653049A0A140TA62 436 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 KRT87PA6NCN2 255 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 PRR19A6NJB7 356 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 PDLIM1O00151 329 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 MANBAO00462 879 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 KRT34O76011 436 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 KRT6AP02538 564 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 KRT6BP04259 564 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 RPN2P04844 631 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 CEACAM5P06731 702 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 FUT4P22083 530 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 GPX3P22352 226 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ITPKAP23677 461 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ACSL1P33121 698 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 KRT6CP48668 564 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 RIPK1Q13546 671 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ABRAXAS2Q15018 415 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ATP6AP1LQ52LC2 224 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 Q6ZSR9 355 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 MIER2Q8N344 545 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 OR9A1PQ8NGU1 263 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 PYCR2Q96C36 320 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 UHRF1Q96T88 793 aaPredicted RBP9.06□□□□□ -0.96
GNE-206ENST00000543356 ATG10Q9H0Y0 220 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 SDR39U1Q9NRG7 319 aaPredicted RBP9.06□□□□□ -0.96
GNE-206ENST00000543356 TMEM45AQ9NWC5 275 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 GIMAP2Q9UG22 337 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ZNHIT2Q9UHR6 403 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 MRPS17Q9Y2R5 130 aaKnown RBP9.06□□□□□ -0.96
GNE-206ENST00000543356 CCL27Q9Y4X3 112 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ANKRD12Q6UB98 2062 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 FPGTO14772 594 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 LSM1O15116 133 aaKnown RBP9.06□□□□□ -0.96
GNE-206ENST00000543356 SLC31A1O15431 190 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 RGS14O43566 566 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 PEX11AO75192 247 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 SLC16A8O95907 504 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ITGAXP20702 1163 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 HNRNPA2B1P22626 353 aaKnown RBP9.06□□□□□ -0.96
GNE-206ENST00000543356 PGM1P36871 562 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 RAP1GDS1P52306 607 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ZNF33BQ06732 778 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms